Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g3820 ATGGGTTTATCTTCAAATTCATCAAACGAATCGATACAATTATGCATATTCGATTTACGAAGAGGCCAACACGAAGGTCAAGAACTCGATAAGATCTTGTTCTTCTTCCCTTCTGGTTTACCTTTCTCCAAACAACTTGCGGTTATCGGTCTCAGTGAAGGACTCATCACTTTCACTAGAATTTTCTCTCCTCAAGCTGCTTGTGACTCCATTGAAGCTGAAAGACATTCTCATGTTTTTCATGAACCCGAACCCGATATTTGGATGGTCTTGGTGGTGGAGAAAAGTAATGATTCAGAACCTATATGGAGAGATGATGCATTGAGAAAAGTTCTCAAGGAAATTCACTCCCTTTTTGTAATGTTTCATGGACCTGTAAGAGCTATGCTTGAGAAAGAACCTGGTGGAGGACTAGTGAGACGCCATTTGTATTCCTTTATCATGGATTATTTAAGGGATTTTCTTGTTGGGAAGAAGTTCCTTCTACCTTCGTTCCGTGACTGCTTAAAGGAACGTGGAACTGTGCAGATGCTGACAATAACTCGCGAGGCTGCAATTGAAGTCCAGTCGCTTGTCAGGGTGCTCGAATCTTCTGCTGCAAACACTCCCTGCTACTCTTTGATTTTATTTCAAGACCTGTTGGTGTCTACAACACTATCTCCAGATGACACCATAAACTTATTCACATATGCTGTGCTAAGGTTGACTCCGCGTGCTCTATCTTCTGGAACAAGTTCCTGGTCCTACTTACGTAAAGGAAACATTGCTTCTAATGTTGTCACCGAGACTAATGTGGCCCCTCCAAGCTCTATGCCTGAAAGTTTTTATGGATCATCTGATATTTCCCCCGGGGAGGATAACAACTATCATGTTGTCAGGCCCTTGCAGAGTGACAAATGGTCCAAGGGAAAAGATGGCTATCTTGTCACTGATTTATGGGGTGCAGAGGTTGGTACGTGGGTGTTTGCTACTCCAACAGTATTGCTTCAACAGACAGGGGAGAGAATGTATCTTTGTGCTTATCAGCACAGGAGCCTTACTTTGATGCTTCTTATCCCCATATCCTCAATACCTAATGGGGAGCAAGGTGTCTCGGCTGTGAAGCAACAAGTTCTTGAAAATGCATCGCTTAAGATATTGAAAATTGAAGAGAAACTATCCAAAGGATGGGGTGGTGAGAACGCATATCATGTCGGCGGGTACCGCTATTTATTAGTGGATGGTGATAGAAATGTATCCAGAGCTTCTCCAGCAACAAAAGTTACAACTTTAACTAAGGAATCCTTACTTGCTATGAATAAGCTTAGGCAGGAGGTTGAGTTGGAGAAGAATCGTGCAAAACTAGACGAGCATAGTTGTGAGAAAGATCTAGAGGTTTGCATAAGAGCAAAGAATAATGCCTGGGTTATTTCTCGAGTTACAAGAGGGAAGGAACTTTACATGGTTCTAGAGAAAGCCAATGAAACCCTTCTATATGCCTCAGATGCTGTTGAGAAGTTTAGTAACAGGTATTGTGATGGAACTTTTTCACTGGATTAA 1539 0.4211 MGLSSNSSNESIQLCIFDLRRGQHEGQELDKILFFFPSGLPFSKQLAVIGLSEGLITFTRIFSPQAACDSIEAERHSHVFHEPEPDIWMVLVVEKSNDSEPIWRDDALRKVLKEIHSLFVMFHGPVRAMLEKEPGGGLVRRHLYSFIMDYLRDFLVGKKFLLPSFRDCLKERGTVQMLTITREAAIEVQSLVRVLESSAANTPCYSLILFQDLLVSTTLSPDDTINLFTYAVLRLTPRALSSGTSSWSYLRKGNIASNVVTETNVAPPSSMPESFYGSSDISPGEDNNYHVVRPLQSDKWSKGKDGYLVTDLWGAEVGTWVFATPTVLLQQTGERMYLCAYQHRSLTLMLLIPISSIPNGEQGVSAVKQQVLENASLKILKIEEKLSKGWGGENAYHVGGYRYLLVDGDRNVSRASPATKVTTLTKESLLAMNKLRQEVELEKNRAKLDEHSCEKDLEVCIRAKNNAWVISRVTRGKELYMVLEKANETLLYASDAVEKFSNRYCDGTFSLD* 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g3820 512 Pfam First Longin domain of INTU, CCZ1 and HPS4 15 124 IPR043987 GO:0016192
Mtr8g3820 512 PANTHER UNCHARACTERIZED 1 512 IPR013176 GO:0016192|GO:0035658
Mtr8g3820 512 PANTHER VACUOLAR FUSION PROTEIN CCZ1 HOMOLOG B 1 512 - -
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g3820 8 48832228 48838862 Mtr8g3820 8 48832228 48838862 ECH