Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g3819 ATGAGCCGGCCAATGGAAGAAGATGCTGTCGGGAAGAATGAGGAAGAGGAATTCAACACTGGTCCACTATCTGTACTCATGATGAGTGTGAAAAACAACACACAGGTTCTGATCAATTGTCGTAACAACAAAAAGCTTCTAGGCCGTGTCAGGGCTTTTGATAGACACTGCAATATGGTTCTTGAAAATGTCCGGGAAATGTGGACTGAGGTGCCTAAGACCGGTAAAGGAAAGAAGAAGGCTCAGCCAGTCAACAAGGATCGTTTCATCAGCAAAATGTTCCTTCGTGGAGATTCTGTCATCATTGTTCTTAGGAACCCCAAATAA 327 0.4404 MSRPMEEDAVGKNEEEEFNTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKGKKKAQPVNKDRFISKMFLRGDSVIIVLRNPK* 109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g3819 108 Pfam LSM domain 29 103 IPR001163 -
Mtr8g3819 108 Gene3D - 16 108 - -
Mtr8g3819 108 PANTHER SMALL NUCLEAR RIBONUCLEOPROTEIN SM D2 1 108 IPR027248 GO:0008380|GO:0030532
Mtr8g3819 108 PANTHER SMALL NUCLEAR RIBONUCLEOPROTEIN SM D2 1 108 - -
Mtr8g3819 108 CDD Sm_D2 18 107 IPR027248 GO:0008380|GO:0030532
Mtr8g3819 108 SMART Sm3 26 105 IPR001163 -
Mtr8g3819 108 SUPERFAMILY Sm-like ribonucleoproteins 21 106 IPR010920 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g3819 Mtr-Chr8 48827086 48830590 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g3819 8 48827086 48830590 Mtr8g3819 8 48827086 48830590 ECH