Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g3808 ATGGTTTCAAGATCTTATTCAAATCTACTAGAGCTAGTCTCTGGTGACTCTCCAACGTTTGAAAACATCAACAGGAGAATTCCAAGGATTATGACTGTTGCTGGTTTGATATCTGATGTTGATGATGACCCTCTGGAGACTGGTTGTTCTGAACCTTCTTCCTCATCTGTTCAAAGAGAGAGGATCATAATAGTGGCTAATCAACTTCCTATAAAGGCTCAGAGGAAGCAAGATGGTAATAACATGAATAAATGGTTTTTCAGTTGGGATGAGAACTCACTTCTACTTCAACTCAAAGATGGGTTAGGAGATGATGATACTGATGTTATTTATGTTGGATGTCTTAAAGAAGATGTTCATCCAAATGAACAAGATGAGGTTTCACAGATACTTCTTGAGACTTTTAAATGTGTCCCTACTTTTCTCCCAGGTGATCTTTTTACAAGGTATTATCATGGCTTTTGCAAGCAACAGTTATGGCCACTGTTCCATTACATGTTGCCTCTGTCACCAGGCCTTGGTGGTAGGTTCAATAGGTCACTGTGGCAGGCTTATGTTTCAGTCAATAAGATATTTGCTGATAGGATTATGGAGGTGATTAACCCTGAAGATGATTATGTTTGGATACATGATTATCATCTCATGGTGTTACCAACTTTCTTGAGGAAGAGGTTTAATAGAGTGAAACTTGGTTTCTTTCTCCACAGCCCTTTTCCTTCATCAGAGATTTACAAGACATTGCCTATTAGGGAAGAACTTTTGAGAGCTCTTTTAAATGCTGATTTGATTGGTTTCCACACTTTTGATTATGCAAGACATTTCCTATCATGTTGTAGTAGGATGCTTGGTCTATCCTATGAATCCAAAAGGGGTTATATTGGGATTGAGTATTATGGTAGGACAGTTAGTATCAAAATTCTTCCTGTTGGCATACACATGGGTCAGCTTCAATCAGTTCTAAGCCTACCAAAGACTGAAGAGAAAGTTTCTGAGCTCATACAACAGTTTTCTAATAATGGAAAGATAATGTTACTTGGTGTGGATGACACAGATATCTTTAAGGGGATAAGCTTGAAGTTGTTAGCCATGGAGCAGCTTCTTATTCAGCACCCTGAGTGGCATGGAAAGGTTGTATTGGTTCAGATAGCTAATCCTGCAAGGGGGAAAGGGAAGGATGTGAAGGAAGTGCAAGCCGAGACAAAGGCGACGGCGAAGCGGATTAATGAAAGATTTGGGAAGCCTGGTTATGATCCTGTCATTCTGATTGAGGAGCCATTAAGGTTTTACGAGAAAGTTGCATACTATGTTGTAGCTGAGTGTTGTTTGGTGACTGCAGTTAGGGATGGGATGAATCTTATACCTTATGAATATATAATCAGTCGTCAAGGAACTGAAAAATTGGACAAAGTTTTGGGTGTAGATGCTTCCTCTAAGAAAAGCATGTTGGTTGTGTCTGAGTTTATTGGTTGTTCACCATCTTTAAGTGGAGCTATCAGAGTGAATCCATGGAATATTGATGCAGTAGCTGATGCAATGGACTCAGCTTTGGAAATGGCTGATTCAGAGAAACAGCTTAGGCATGAGAAGCATTACAGATATGTTAGTACTCATGATGTCGGTTACTGGGCTCGTAGCTTCTTGCAAGATTTGGAAAGGATTTGTAGTGATCATGTAAGGAGAAGGTGGTGGGGCATTGGTTTTGGATTAAGTTTTAGAGTTGTAGCACTTGATCCAAACTTCAAGAAGCTTTCAATGGAGCACATTGTTTCTGCTTACAAGCAGACGAAAACTAGGGCGATCCTTCTAGATTATGACGGCACTCTAATGCCTCAGGCTTCCATCGATAAGAGTCCAATAAGTAATTCCATCAAAATGCTTAATAGTTTGTGTAGAGACGAGAACAACATGGTGTTTATAGTAAGTGCTAAAAGCCGAAAGGCGCTTACTGAATGGTTTTCTCCTTGTGAGAATCTGGGAATTGCTGCTGAGCATGGTTACTTTTTAAGACTGAAGCGGGATGAAGAATGGGAAACTTGTGCACCTGTAGCAGATTTCAGTTGGAAACAAATTGCAGAGCCTGTGATGAAGCTTTATACCGAAACAACAGATGGATCCACGATTGAAGATAAGGAGACAGCACTTGTTTGGTGCTACGAGGATGCAGATCCAGATTTTGGATCATGCCAAGCGAAAGAACTTCTTAATCATCTTGAAAGTGTGCTTACAAATGAACCAGTAACTGTGAAGAGTGGCTTGAATAATGTGGAGGTTAAACCACAGGGTGTGAACAAGGGGCTTGTGGCTAAACGCCTACTTTCGGCCATGCAAGAAAAGGGAATGTCACCTGAATTTGTTTTGTGCATTGGTGACGACAGATCTGATGAGGACATGTTTGAGGTCATCACTAGTTCCGGTCCTTCCATGGCTCCTAGGGCTGAAGTATTTGCATGCACTGTTGGTCGAAAACCCAGCAAGGCTAAGTACTACCTGGATGATACTACTGGTATAGTGAGAATGGTGCAGGGTTTAGCCTGTGTTTCAGACCAAATAGTTTTATCTTAG 2562 0.4075 MVSRSYSNLLELVSGDSPTFENINRRIPRIMTVAGLISDVDDDPLETGCSEPSSSSVQRERIIIVANQLPIKAQRKQDGNNMNKWFFSWDENSLLLQLKDGLGDDDTDVIYVGCLKEDVHPNEQDEVSQILLETFKCVPTFLPGDLFTRYYHGFCKQQLWPLFHYMLPLSPGLGGRFNRSLWQAYVSVNKIFADRIMEVINPEDDYVWIHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYKTLPIREELLRALLNADLIGFHTFDYARHFLSCCSRMLGLSYESKRGYIGIEYYGRTVSIKILPVGIHMGQLQSVLSLPKTEEKVSELIQQFSNNGKIMLLGVDDTDIFKGISLKLLAMEQLLIQHPEWHGKVVLVQIANPARGKGKDVKEVQAETKATAKRINERFGKPGYDPVILIEEPLRFYEKVAYYVVAECCLVTAVRDGMNLIPYEYIISRQGTEKLDKVLGVDASSKKSMLVVSEFIGCSPSLSGAIRVNPWNIDAVADAMDSALEMADSEKQLRHEKHYRYVSTHDVGYWARSFLQDLERICSDHVRRRWWGIGFGLSFRVVALDPNFKKLSMEHIVSAYKQTKTRAILLDYDGTLMPQASIDKSPISNSIKMLNSLCRDENNMVFIVSAKSRKALTEWFSPCENLGIAAEHGYFLRLKRDEEWETCAPVADFSWKQIAEPVMKLYTETTDGSTIEDKETALVWCYEDADPDFGSCQAKELLNHLESVLTNEPVTVKSGLNNVEVKPQGVNKGLVAKRLLSAMQEKGMSPEFVLCIGDDRSDEDMFEVITSSGPSMAPRAEVFACTVGRKPSKAKYYLDDTTGIVRMVQGLACVSDQIVLS* 854
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g3808 853 TIGRFAM T6PP: trehalose-phosphatase 596 842 IPR003337 GO:0003824|GO:0005992
Mtr8g3808 853 CDD HAD_TPP 599 833 - -
Mtr8g3808 853 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 61 554 - -
Mtr8g3808 853 SUPERFAMILY HAD-like 598 843 IPR036412 -
Mtr8g3808 853 Gene3D - 730 851 IPR023214 -
Mtr8g3808 853 Gene3D - 597 729 IPR023214 -
Mtr8g3808 853 CDD GT20_TPS 61 551 IPR001830 GO:0003824|GO:0005992
Mtr8g3808 853 PANTHER ALPHA,ALPHA-TREHALOSE-PHOSPHATE SYNTHASE [UDP-FORMING] 6 1 850 - -
Mtr8g3808 853 Pfam Glycosyltransferase family 20 61 551 IPR001830 GO:0003824|GO:0005992
Mtr8g3808 853 Pfam Trehalose-phosphatase 601 833 IPR003337 GO:0003824|GO:0005992
Mtr8g3808 853 TIGRFAM HAD-SF-IIB: HAD hydrolase, family IIB 600 801 IPR006379 -
Mtr8g3808 853 Gene3D Glycogen Phosphorylase B; 53 317 - -
Mtr8g3808 853 Gene3D Glycogen Phosphorylase B; 318 535 - -
Mtr8g3808 853 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 1 850 IPR001830 GO:0003824|GO:0005992
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g3808 Mtr-Chr8 48724065 48727841 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g3808 1 851 Trehalose Biosynthesis Gene Families AT1G68020 80.347 0.0 1452
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g3808 8 48724065 48727841 Mtr8g3808 8 48724065 48727841 ECH