Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g3806 ATGGATGAAGGCATAGTTGAGAAAGCTCTTAACAGCTTAGGAAAAGGCTTCGATTTGACATCAGATTTCAGGCTCAAATTCTGCAAAGGTGAAGAACGTTTGATTCTTCTCAATGAAATAGAGAAAAGAGAGCTTTCTGTGCCAGGTTTTGGATCCATAAAAGATGTCTCCGTTGACATCAAATGTGATAAAGGCGACAGGACACGTTATCAATCCGACATCCTCACCTTCACCCAAATGTCAGAGTTATTCAATAGGAAGAGTTCGATACCTGGGAAAATTCCAAGTGGATATTTCAATACAGTATTTGGGTTTGATGAGGGTTCATGGGCAGCTGAAGCAGCTAACACAAAATGTTTAGGTGTTGATGGATATTTGATAAAACTATTCAATCTTCATATTGATCCATATCCACTTCTTCTTTCTAAACAAGTCATTCAAGCTGTTCCTTCTTCATGGGATCCTCCTGCACTTGCAAGATTCATCGAGAACTTTGGGACTCACATTCTTGTGGGTCTTAGCATTGGAGGGAAAGATTTATTGTTGGTAAAGCAAGACGTGTCCTCCAACTTGGTACCATCAGAGCTCAAGAATCACCTGGATGAGCTTGGAGAACAGTTATTTAGTGGGACATGCAATTTCCTTCCCAAAAATAAAGATCAGAAACACAAGGTACCAGCAGCCTTCGATGTTTTTGGTCCGCAAATCGTTGCGTTCAACGGCTCTACATCCGTCTGTGCAAAAGATGGAATAAATGTAATATGTGTAAAGAGGGGAGGGGATACTCAAATGAGCAGCCATAGTGAATGGCTGCTCACGGTTCCTAACAAACCAGATGCAATTGATTTTAGCTTCATTCCCATTACCTCTCTTCTTAAAGGTGCTTCTGGAAGGGGATTCCTCTCCCATGCTATCAACCTCTATCTTCGATATAAGCCACCAATGTCAGATTTGTCATACTTTCTTGACTACCAAGGATACAAGATTTGGGCTCCTGTTCACAATGATCTACCTCTTGGTCCAACTACAAACATATCTACTATTTCACCTTTTCTCACTCTCAATTTGATGGGTCCCAAACTTTATGTAAATACAGACAAGGTAACAGTTGGCAAAAGGCCAATCACAGGTATGCGTTTGTTTCTTGAAGGAATGAAATGCAACAGGTTAGCCATACACGTGGAACATCTATTAAACACTCCAACAATGCTTAGCAACAAAATTGAAGACACAACAATATGGTCAGAAGAAATTAACGATGAACGTTTCTTTGAAGCAATAAGCGGGAAGAAATTTTCCCATGTATGTACAGCACCAGTGAAATACAATCCTAAATGGAGCACTGAAAAAAATGTGGCATTTATTGTCACAGGAGCACAACTTCATGTTAAGAAACATGACACGAAGAGAGTCCTTCTTCATCTGAGGTTATTGTTCTCTAAGGTGTCAAATTCTTTTGTTGTTAAATCAAATTGGACAAAGGGTTCTTCTGGATTGTCCCAGAAATCTGGAATTTTCTCAGCAATAAGCACATCAATATCTGGTTCTAGTAAAGACCAAAAAAAATCAACAGTACTTTTGGATTCTAGTGTTTTTCCAACAGGACCTCCAGTACCTGTACAAACGCAAAAAATGTTGAAATTTGTGGACACGTCAGAGTTATGTAAAGGCCCACAACACACTCCAGGTCATTGGTTAGTTACAGGGGCAAAATTGGTCATGGATAAGGGTAAGATATGCTTGTGGGCCAAGTTCTCTTTGTTAAATACTGACCTATAA 1779 0.3963 MDEGIVEKALNSLGKGFDLTSDFRLKFCKGEERLILLNEIEKRELSVPGFGSIKDVSVDIKCDKGDRTRYQSDILTFTQMSELFNRKSSIPGKIPSGYFNTVFGFDEGSWAAEAANTKCLGVDGYLIKLFNLHIDPYPLLLSKQVIQAVPSSWDPPALARFIENFGTHILVGLSIGGKDLLLVKQDVSSNLVPSELKNHLDELGEQLFSGTCNFLPKNKDQKHKVPAAFDVFGPQIVAFNGSTSVCAKDGINVICVKRGGDTQMSSHSEWLLTVPNKPDAIDFSFIPITSLLKGASGRGFLSHAINLYLRYKPPMSDLSYFLDYQGYKIWAPVHNDLPLGPTTNISTISPFLTLNLMGPKLYVNTDKVTVGKRPITGMRLFLEGMKCNRLAIHVEHLLNTPTMLSNKIEDTTIWSEEINDERFFEAISGKKFSHVCTAPVKYNPKWSTEKNVAFIVTGAQLHVKKHDTKRVLLHLRLLFSKVSNSFVVKSNWTKGSSGLSQKSGIFSAISTSISGSSKDQKKSTVLLDSSVFPTGPPVPVQTQKMLKFVDTSELCKGPQHTPGHWLVTGAKLVMDKGKICLWAKFSLLNTDL* 593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g3806 592 ProSiteProfiles Membrane attack complex/perforin (MACPF) domain profile. 1 322 IPR020864 -
Mtr8g3806 592 PANTHER OS02G0736300 PROTEIN 3 590 - -
Mtr8g3806 592 PANTHER MACPF DOMAIN-CONTAINING PROTEIN CAD1 3 590 IPR044663 GO:0006952|GO:0012501|GO:2000031
Mtr8g3806 592 SMART MACPF_8 117 310 IPR020864 -
Mtr8g3806 592 Pfam MAC/Perforin domain 100 308 IPR020864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g3806 Mtr-Chr8 48707852 48711868 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g3806 8 48707852 48711868 Mtr8g3806 8 48707852 48711868 ECH