Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g3799 ATGTCAACACCCAACTACGCCCACGCACCACTCCTTCGCCCCCGCCGCGTGGGTCGCACGCCGGTCCTCGCCCTCCTTCTCGGCCGCCGCGGTCCTTCCGTCTTAGTCCGCGAAACAGCGGCGCGTGAGCTTGAGGAACGCCGCGCCGATTGGGGTTATTCTAAGCCGGTGGTATTACTGGACGTGACGTGGAACACGGTCTTTGTGGTGGTTGCAGCGGTTATGTTAGGTTGCAGTGTTGATGAGAATCCGAATACGCCGATCCGGTTGTGGATCTTTGGATACGCGGTACAGTGTTTGGTACACGTGGCGTTGGTGTTATTAGAGTATAGGAGGAGGAACGTGATTGGTGGTGGAAGGGAAAGGGATGAAGAATCTCTTGATGATGTTAATGATAGTGAAGAGGATGATGATGTTGAATTTCTGAATTCTTCTAGCTCCGGATTTGCAAAACGATGTTCATCATTGAATACCATGCTTTCATTGCTTTGGTGGATGGTGGGATTTTACTGGGTTGTCAATGGTGGTGATATTCTAATTCAAGATGCTCCACGGTTGTACTGGTTGGCTGTTGTCTTCCTAGCTTTTGATGTCTTCTTTGCTGTCTTTTGTGTTGCTTTGGCATGCTTAATTGGCATTGCCCTCTGCTGCTGTTTACCATGTATTATTGGTATTCTCTATGCCGTTGCGGGACAGGAGGGTGCATCTGAATCAGATCTCAGTACACTTCCAAAATACAGGTTTCAAGTGCCAGGCAATGAGGAAACACCTAGTCCGAAAGGTGGATCAATGGTTCCAATTGAAAATAGTAGTGGTGCAAATGAACGAGTACTTTCACCTGAAGATGCGGAATGTTGTATATGCATCTCTCCCTACGAGGATGAAGCAGAACTTCATGCTCTTCCTTGTAACCACCATTTCCATTCCACGTGCATAGTGAAATGGTTAAAGATGAATGCAACTTGTCCTCTTTGCAAGTTCAATATTCTAAAGGGAAATGAACAGGTGTGA 1011 0.4738 MSTPNYAHAPLLRPRRVGRTPVLALLLGRRGPSVLVRETAARELEERRADWGYSKPVVLLDVTWNTVFVVVAAVMLGCSVDENPNTPIRLWIFGYAVQCLVHVALVLLEYRRRNVIGGGRERDEESLDDVNDSEEDDDVEFLNSSSSGFAKRCSSLNTMLSLLWWMVGFYWVVNGGDILIQDAPRLYWLAVVFLAFDVFFAVFCVALACLIGIALCCCLPCIIGILYAVAGQEGASESDLSTLPKYRFQVPGNEETPSPKGGSMVPIENSSGANERVLSPEDAECCICISPYEDEAELHALPCNHHFHSTCIVKWLKMNATCPLCKFNILKGNEQV* 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g3799 336 SMART ring_2 285 325 IPR001841 -
Mtr8g3799 336 Pfam Ring finger domain 284 326 IPR001841 -
Mtr8g3799 336 PANTHER TARGET OF ERK KINASE MPK-1 4 336 - -
Mtr8g3799 336 SUPERFAMILY RING/U-box 275 330 - -
Mtr8g3799 336 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 4 336 - -
Mtr8g3799 336 ProSiteProfiles Zinc finger RING-type profile. 285 326 IPR001841 -
Mtr8g3799 336 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 266 334 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g3799 Mtr-Chr8 48572461 48576521 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g3799 1 335 C3H Transcription Factor Family AT1G68070 65.143 8.88e-159 446
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g3799 8 48572461 48576521 Mtr8g3799 8 48572461 48576521 ECH