Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g3798 ATGTCGTGGGAAGACGAGATTGTGATTCGTGATGTCACCAACGCCGGTCTTGTCGTCAGTGATCGAATTGGCCGTGAAATTTCTTCTCAGCTCGACCTCGAAGAATCTCTAGAAGCTTCCCGATATGCCAGTCATCCTTATTCAACTCACCCTAGAGAGTGGCCCCCTTTGGTTGAGGTAGCAAATACATGGGAGTTGCCTCCTGTTCTTATTGAAAGATACAATGCGGCTGGTGGGGAAGGAACTGCTTTTTGTGGAATATTTCCTGAAATACGTAGGGCATGGGCGTCAGTTGACAATTCTTTGTTCCTCTGGCGTTTTGATAAGTGGGATGGTCAGTGTCCTGAATATAGTGGCGAGGAACAAGCTATTTGTGCTGTTGGTCTGGCAAAATCAAAGCATGGTGTTTTTGTTGAAGCTATCCAGTATCTTTTAATCTTAGCAACCCCTGTTGAGTTAATTTTAGTTGGAGTGTGCTGCTCTGGAGGAGCAGATGGCTCAGATCCATTTGCAGAAGTTTCGTTACAGCCATTGCCAGATTATACAATACCATCCGATGGGGTTACGATGACAAGTGTGGCATGTACTGATAAGGGCCGCATTTTCCTTGCTGGTCGTGATGGCCACATATATGAGCTTATTTATTCAACTGGCTCAGGATGGCAAAAGCGCTGCAGAAAAGTATGCGTCACTGCTGGTCTAGGAAGTGTAATTTCAAGATGGGTCATACCAAATGTATTCAATTTTGGAGCTGTTGACCCTGTTGTTGAAATGGTTTTTGACAATGAGAGACAGATATTGTATGCACGGACTGAAGAGATGAAGCTTCAGGTTTATGTTCTTGGACCAATTGGTGATGGGCCACTAAAGAAAATTGCTGAAGAAAGGAATCTTGTCAATCACAAAGATGCACATCATGGAGGTAGACAATCAAGTGGATCAAGAGTATCAAGTCGATCACCAAAGCCATCTATTGTTTGCATCTCACCCTTATCTACCCTTGAATCGAAATCGCTACATCTTGTTGCTGTTTTATCAGATGGTAGAAGGATGTACCTATCCACCTCTCCTTCTAGCGGAAGCCTGAATGGATTCAACACCAGCCATCACAAGCCTAGCTGTTTAAAGGTTGTCACAACACGGCCTTCTCCTCCTTGGGGTGTTAGTGGCGGTCTCACCTTTGGAACCATGGCTCTTGCTGGTAGACCTCAAAATGAGGATCTCTCGTTGAAAGTCGAGGCAGCCTATTATTCTGCTGGAACTCTTATCCTTTCTGATGCATCACCTCCAACTATGCCTTCACTCCTTGTTTTAAACAGGGATTCGAGCACTCAGTCCTCACCATCAGGAAATCTAGGAACAGGTACGAGGAGTTCCCGGGCATTACGGGAAACTGTATCTTCTTTACCAGTTGAAGGACGAATGCTTTCTGTGGCCGATGTTTTACCTCTACCAGACACTTCAGCTACTGTTCAGTCTCTATACTCAGAAATTGAGTTTGGTGGTTACGAGAGCTCAATGGAATCATGTGAAAGGGCGTCTGGCAAACTGTGGGCAAGAGGAGATCTCTCAACCCAACATATACTGCCAAGGAGGAGGATTGTCATCTTCAGCACCATGGGCATGATGGAAATTGTTTTTAACAGGCCATTAGACATTTTAAGGCGGCTATTAGAGTCCAGTTCTCCGAGATCAGTTTTAGAAGATTTCTTCAATCGTTTTGGAGCCGGAGAGGCTTCTGCGATGTGTTTAATGCTAGCTTCGAGGATAGTACATTCTGAAAACTTTATCAGCAATGTTATTGCAGAGAAGGCAGCTGAAGCTTTTGAGGATCCAAGACTTGTTGGCATGCCACAACTTGAAGGCAGTAATGCATTATCAAACACAAGAACAGCTGCTGGTGGATTTAGCATGGGCCAGGTTGTTCAGGAGGCTGAGCCTGTTTTTTCAGGTGCACATGAAGGGCTCTGTTTGTGTTCATCTAGATTACTCTTTCCTCTATGGGAACTACCTGTAATGGTTATAAAAGGAAGTTTAAGTGCTTCAGGCACTTCATTTGAAAATGGGGTAGTTGTATGTAGACTATCCATCGAGGCTATGCAAGTCCTTGAACACAAACTTCGATCTTTAGAAAAATTCTTAAGATCTAGAAGGAACCAGAGGAGAGGACTCTATGGTTGTGTAGCAGGATTAGGAGATGTAAGTGGTTCCATTCTATATGGTGGTGGTTCTGCATTGGGTGCTGGTGACCGAAGTATGGTAAGAACCTTGTTCGGTGCATATTCCAAAAATATGGAGTCTAATGGCGGTGGAGCCGCAAATAAAAGGCAAAGGTTGCCGTACAGTCCTGCAGAATTAGCTGCCATGGAGGTGAGGGCAATGGAGTGCATTAGGCAGTTGCTCCTTAGATCTGGTGAAGCTCTCTTTTTGCTTCAACTTCTCTCACAGCATCATGTCACTCGTCTGATTCAAGGATTTGATGCTAACCTTCAACAAGCCCTAGTTCAGTTAACATTTCATCAACTAGTTTGTTCTGAAGAGGGTGACCATCTTGCTACAAGGCTTATATCTGCTCTAATGGAGTATTACACTGGTACAGATGGTAGGGGAACTGTAGATGACATTAGTAAGAGATTAAGAGAGGGTTGCCCGAGCTACTATAAGGAATCTGATTACAAATTCTTCTTAGCCGTGGAAGCCCTGGAGAGAGCTGCTGTGACTATAGATGATGAGGAAAAGGAGACTCTCGCGCGGGAGGCATTGAATGCCTTAAGCAAAGTTCCAGAGTCTGCAGACTTACGTACTGTTTGCAAACGTTTTGAGGATTTAAGGTTTTATGAAGCTGTAGTTTGCTTACCTCTTCAGAAGGCACAGGCTATCGACCCTGCAGGCGATGCTTATAATGATGAAATTGATGCCACGGTCAGAGAACAAGCACTTGCTCAGCGTGAGCAGTGTTATGAAATAATCATCAGTGCGCTGCGGTCTCTTAAAGGTGACCCCTCACGGAAGGAATTTGGTTCTCCCATTGGATCTGCTTCACAATCTGCACTTGATCCAGCCTCTCGGAAAAAGTATATAAGCCAAATTGTTCAGCTGGGTGTCCAATCACCCGACAGAATTTTCCATGAGTATCTTTATCAGGCTATGATAGACTTAGGTCTTGAGAATGAATTGTTGGAGTATGGAGGCCCTGACCTATTGCCCTTCTTGAAAAGTGCTGGTCGTACACCCATACATGAGGTTCGTGCTGTGACTGCAACAACTTCTCCAATGGGCCAATCGGGAGCACCTATGTCGTCCAATCAAGTCAAGTACTTTGAACTTTTGGCACGGTATTATGTGTTGAAGCGGCAACACATGCTTGCTGCTCATGCATTGCTAAGACTGGCCGGAAGGCCTTCTACTGATGGAGTTCCTACTCTTGAGCAGAGGTGTCAATACCTAAGCAATGCAGTTTTACAGGCAAAGAATGCAACAAATAGCGATGGGTTGGTTAGTTCTACTCGGAGTTCCAGCGACACTGGATTACTAGATATGCTTGAAGGGAAGCTTGCTGTTCTTCGGTTTCAGATAAAAATCAAAGAGGAACTAGAGCATATGGCTTCCAGTTCTGAGGTTTTACACAGCACATCCAATTCTGTTGAAAATGGTTTAGTCTCTGATGCCAGTCCAACTGTTGATGCCAATTTTGCAAATGCAACACGCGAGAAAGCCAAAGAGCTATCATCAGATTTGAAGAGCATAACACAGTTATATAATGAATATGCTGTTCCCTTTAAACTCTGGGAGACATGCCTGGAGATGCTGTACTTTGCTAACTATTCTGGTGATAGTGACAGTAGCATTGTCAGAGAGACATGGGCTCGACTTATAGATCAAGCTATTTCAGGAGGTGGCATTGCTGAAGCTTGCTCTGTGCTAAAGAGACTTGGGCCCCGCCTTTATCCTGGTGATGGAACTGTTTTTCAGCTTGACATTATTTGTCTTCACCTTGAGAAAGCTGCACTGGAGAGATTAAATACAGGGGTTGAATCCGTTGGAGATGAAGATGTTGCGAGAGCCCTTGTTTCTGCTTGTAAGGGTGCAGCAGAACCTGTATTGAACGCATATGATCAATTGTTATCAAATGGGGCAATTTTGCCATCCCCAAATCTTAGATTACGGATGCTGAGATCTGTTCTAGTGGTACTTCGTGAGTGGGCTATGTCTATATATTCACACAGGATGGGTACAGGTGCCACTGGTTCTTCCATAATAATAGGCGGTGGATTCTCATTGGAACGTACAGTTGCTAGCCAAGGAATTAGGGACAAAATCACAAGTGTAGCAAACAGGTATATGACTGAAGTACGGAGGTTAGCCCTTCCACAGAGCCAAACAGAAGGGGTTTACTGCGGCTTTAAAGAACTTGAAGAGTCTCTCATAAGTCCTCATTCATTTGATCGATTTTGA 4455 0.4435 MSWEDEIVIRDVTNAGLVVSDRIGREISSQLDLEESLEASRYASHPYSTHPREWPPLVEVANTWELPPVLIERYNAAGGEGTAFCGIFPEIRRAWASVDNSLFLWRFDKWDGQCPEYSGEEQAICAVGLAKSKHGVFVEAIQYLLILATPVELILVGVCCSGGADGSDPFAEVSLQPLPDYTIPSDGVTMTSVACTDKGRIFLAGRDGHIYELIYSTGSGWQKRCRKVCVTAGLGSVISRWVIPNVFNFGAVDPVVEMVFDNERQILYARTEEMKLQVYVLGPIGDGPLKKIAEERNLVNHKDAHHGGRQSSGSRVSSRSPKPSIVCISPLSTLESKSLHLVAVLSDGRRMYLSTSPSSGSLNGFNTSHHKPSCLKVVTTRPSPPWGVSGGLTFGTMALAGRPQNEDLSLKVEAAYYSAGTLILSDASPPTMPSLLVLNRDSSTQSSPSGNLGTGTRSSRALRETVSSLPVEGRMLSVADVLPLPDTSATVQSLYSEIEFGGYESSMESCERASGKLWARGDLSTQHILPRRRIVIFSTMGMMEIVFNRPLDILRRLLESSSPRSVLEDFFNRFGAGEASAMCLMLASRIVHSENFISNVIAEKAAEAFEDPRLVGMPQLEGSNALSNTRTAAGGFSMGQVVQEAEPVFSGAHEGLCLCSSRLLFPLWELPVMVIKGSLSASGTSFENGVVVCRLSIEAMQVLEHKLRSLEKFLRSRRNQRRGLYGCVAGLGDVSGSILYGGGSALGAGDRSMVRTLFGAYSKNMESNGGGAANKRQRLPYSPAELAAMEVRAMECIRQLLLRSGEALFLLQLLSQHHVTRLIQGFDANLQQALVQLTFHQLVCSEEGDHLATRLISALMEYYTGTDGRGTVDDISKRLREGCPSYYKESDYKFFLAVEALERAAVTIDDEEKETLAREALNALSKVPESADLRTVCKRFEDLRFYEAVVCLPLQKAQAIDPAGDAYNDEIDATVREQALAQREQCYEIIISALRSLKGDPSRKEFGSPIGSASQSALDPASRKKYISQIVQLGVQSPDRIFHEYLYQAMIDLGLENELLEYGGPDLLPFLKSAGRTPIHEVRAVTATTSPMGQSGAPMSSNQVKYFELLARYYVLKRQHMLAAHALLRLAGRPSTDGVPTLEQRCQYLSNAVLQAKNATNSDGLVSSTRSSSDTGLLDMLEGKLAVLRFQIKIKEELEHMASSSEVLHSTSNSVENGLVSDASPTVDANFANATREKAKELSSDLKSITQLYNEYAVPFKLWETCLEMLYFANYSGDSDSSIVRETWARLIDQAISGGGIAEACSVLKRLGPRLYPGDGTVFQLDIICLHLEKAALERLNTGVESVGDEDVARALVSACKGAAEPVLNAYDQLLSNGAILPSPNLRLRMLRSVLVVLREWAMSIYSHRMGTGATGSSIIIGGGFSLERTVASQGIRDKITSVANRYMTEVRRLALPQSQTEGVYCGFKELEESLISPHSFDRF* 1485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g3798 1484 Pfam Non-repetitive/WGA-negative nucleoporin C-terminal 871 1291 IPR007187 -
Mtr8g3798 1484 Pfam Nup133 N terminal like 54 543 IPR014908 -
Mtr8g3798 1484 MobiDBLite consensus disorder prediction 300 323 - -
Mtr8g3798 1484 Gene3D Nucleoporin, helical domain, central subdomain 1056 1153 IPR042537 -
Mtr8g3798 1484 PANTHER NUCLEAR PORE COMPLEX PROTEIN NUP155 2 1481 IPR004870 GO:0005643|GO:0006913|GO:0017056
Mtr8g3798 1484 MobiDBLite consensus disorder prediction 434 463 - -
Mtr8g3798 1484 Gene3D - 531 883 - -
Mtr8g3798 1484 PANTHER BNAC05G49530D PROTEIN 2 1481 - -
Mtr8g3798 1484 MobiDBLite consensus disorder prediction 435 463 - -
Mtr8g3798 1484 Gene3D - 894 1053 IPR042533 -
Mtr8g3798 1484 Gene3D - 1179 1453 IPR042538 -
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g3798 8 48549664 48559912 Mtr8g3798 8 48549664 48559912 ECH