Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g3797 ATGGCCGACGCTTTATCGGCAATTCCGGCAGCCGTTCTTCGTAATCTTGCTGATAAGCTCTATGAGAAGCGCAAAAATGCTGCTCTTGAGATTGAGAATATAGTGAAGCAATTAGCCAGTAATGGTGATCATGATAAAATTGCGGCTGTTATCACTTTGATGACTAATGAATTCACTTATTCACCACATGCCAATCACAGGAAGGGAGGATTGATAGGATTAGCTGCTGCAACTGTTGGGTTGACTTCTGAAGCACCTCAGCATCTTGAGCAAATTGTGCCCCCTGTGCTAAGTTCTTTCTCCGACCAAGATAGCAGAGTTCGTTATTATGCTTGCGAAGCATTATATAACATAGCTAAGGTTGTGAGAGGGGATTTTATTGTATTCTTCAACCAGATCTTTGATGCCTTATGCAAGCTTTCTGCAGATTCTGATCCAAACGTACAAAGTGCTGCTCACCTCTTAGATCGGCTTGTGAAGGATATTGTGACTGAAAGTGATCAATTCAGTATCGAAGAATTTATACCATTGCTGAGGGAGCGCATGAATGTATTGAATCCATTTGTCCGCCAGTTTTTGGTAGGATGGATTACTGTATTGGACAGCGTCCCAGACATTGATATGCTGGGTTTTCTTCCTGATTTTCTTGATGGATTGTTTAATATGTTAAGTGATTCGAGTCATGAAATACGTCAACAAGCTGATTCAGCTCTTTCAGAGTTTCTTCAAGAAATCAAGAACTCACCATCTGTAGATTATGGTCGAATGGCTGAAATACTGGTACAGAGGGCAGGTTCTCCAGATGAGTTTACGAGGCTAACATCTATCACATGGATAAACGAGTTTGTCAAACTTGGTGGAGACCAGCTTGTTCCATATTATGCAGACATTCTTGGAGCCATTTTGCCTTGTATATCAGATAAAGAAGAGAAAATTAGAGTTGTTGCCCGTGAAACCAATGAAGCGCTACGTGGTATCAAGGCTGATCCAGCTGAAGCATTTGATGTAGAATCCATCCTCTCTATTGCCAGGAGGCAGTTATCTAGTGAATGGGAAGCTACTCGAATTGAAGCTTTGCACTGGATAGCAACCCTTTTAAATAAATATCGCACTGAGTGTTTGCAGTTTCTGAATGACATATTCGACACCCTGCTCAAGGCACTTTCAGATCCATCTGATGAGGTTGTTCTTCTAGTTCTTGATGTTCATGCATGCATCGCAAAAGATCCTCAGCACTTTCGTCAGCTTGTTGTTTTCCTGATGCACAATTTCCGGATAGACAATTCACTTTTGGAGAAGCGCGGGGCTTTAATAATCCGCAGGCTTTGTGTGCTTCTGAATGCTGAAAGAGTGTACCGTGAACTTTCTACAATACTAGAGGGGGAATCTGATTTGAATTTTGCATCAATTATGGTTCAGGCTTTGAATTTGATCTTACTTACATCATCAGAACTATCTGAGATGAGAGTTCTTTTGAAGCAATCGCTGGTAAATCCTGCTGGGAAGGATTTATATGTTTCTTTGTATGCCTCATGGTGTCATTCTCCAATGGCGATTATAAGTCTTTGCTTCTTAGCTCAGACTTACCAACATGCTAGTACGGTGATTGAATCTCTGGCAGAGGAGGATATCAATGTCAAATTCTTAGTACAGCTGGATAAATTGATTCGTTTGCTGGAAACTCCGGTCTTTGCTTATCTAAGATTGCAGCTTCTGGAACCTGGAAGATATACATGGTTATTTAAAGCACTGTATGGTCTTCTGATGTTGCTTCCTCAGCAAAGTGCTGCCTTCAAGGTACTAAAAACTCGTTTAAAAGCGGTGCCATCATATTCTTTCAATGGTGACCACTTGAAGAAATCATCCAATGGGAACCCCTATCAATTTCTCCATCACATCTCTGGTGGATCTCACATCACAGAGGATGGTAATGTAGCTGTGGACAATGGGGACCCACACAATGGAATAAATTTTGTTGCAAGGCTACACCAGTTTCATCAAATGCAGCAACAGCATCGCGAGTTTTTTAGAAATCAGGCACAGACGCGCAAAACTTCCACCTCAGTATCAAAGGAGGAGGTACAAAGGCTAGAAGAAGGAGAAGAGGAAACAAGGAGACCTCATTTGAGTGAGCTTAATGTTCCACCAAGATCATCCAAGAGAGCTAGCTAG 2172 0.4167 MADALSAIPAAVLRNLADKLYEKRKNAALEIENIVKQLASNGDHDKIAAVITLMTNEFTYSPHANHRKGGLIGLAAATVGLTSEAPQHLEQIVPPVLSSFSDQDSRVRYYACEALYNIAKVVRGDFIVFFNQIFDALCKLSADSDPNVQSAAHLLDRLVKDIVTESDQFSIEEFIPLLRERMNVLNPFVRQFLVGWITVLDSVPDIDMLGFLPDFLDGLFNMLSDSSHEIRQQADSALSEFLQEIKNSPSVDYGRMAEILVQRAGSPDEFTRLTSITWINEFVKLGGDQLVPYYADILGAILPCISDKEEKIRVVARETNEALRGIKADPAEAFDVESILSIARRQLSSEWEATRIEALHWIATLLNKYRTECLQFLNDIFDTLLKALSDPSDEVVLLVLDVHACIAKDPQHFRQLVVFLMHNFRIDNSLLEKRGALIIRRLCVLLNAERVYRELSTILEGESDLNFASIMVQALNLILLTSSELSEMRVLLKQSLVNPAGKDLYVSLYASWCHSPMAIISLCFLAQTYQHASTVIESLAEEDINVKFLVQLDKLIRLLETPVFAYLRLQLLEPGRYTWLFKALYGLLMLLPQQSAAFKVLKTRLKAVPSYSFNGDHLKKSSNGNPYQFLHHISGGSHITEDGNVAVDNGDPHNGINFVARLHQFHQMQQQHREFFRNQAQTRKTSTSVSKEEVQRLEEGEEETRRPHLSELNVPPRSSKRAS* 724
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g3797 723 Coils Coil 17 37 - -
Mtr8g3797 723 MobiDBLite consensus disorder prediction 679 723 - -
Mtr8g3797 723 MobiDBLite consensus disorder prediction 689 710 - -
Mtr8g3797 723 Pfam Vacuolar 14 Fab1-binding region 65 161 - -
Mtr8g3797 723 PANTHER TAX1 BINDING PROTEIN-RELATED 4 694 IPR026825 GO:0006661|GO:0070772
Mtr8g3797 723 PANTHER PROTEIN VAC14 HOMOLOG 4 694 - -
Mtr8g3797 723 SUPERFAMILY ARM repeat 3 535 IPR016024 -
Mtr8g3797 723 Pfam Vacuolar protein 14 C-terminal Fig4p binding 429 608 IPR021841 -
Mtr8g3797 723 ProSiteProfiles HEAT repeat profile. 92 127 IPR021133 -
Mtr8g3797 723 Gene3D - 1 249 IPR011989 -
Mtr8g3797 723 Gene3D - 250 410 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g3797 Mtr-Chr8 48533937 48543220 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g3797 8 48533937 48543220 Mtr8g3797 8 48533937 48543220 ECH