Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g3785 ATGGGTTCTGAAGGATCCACCGTCGTTGTTCCTAGGAATTTCAGATTATTGGAAGAGCTTGAGCGAGGTGAGAAGGGAATTGGAGATGGAACTGTTAGCTATGGAATGGATGACGCTGATGATATATTCATGCAGTCATGGACTGGGACTATTATTGGCCCCCCGGGTACTGTTCATGAAGGTCGTATCTACCAGTTGAAGTTGTTTTGTGGCAAGGATTATCCAGACAATCCACCATCTGTTAGATTTCAGACAAGGATTAACATGACTTGCGTCAACCAAGAATCTGGAGTGGTTGAACCAAATTTGTTTCCCATGCTTGCTAGTTGGAAAAGAGAGTCTACAATGGAAGATATTTTGCTGCAATTGAAGAAAGAAATGATGTCCCCACAAAACCGGAAGCTATCTCAGCCTCCTGAAGGCAATGAAGATGGAAGGATTGACCAAAAGGGGCTGGTGCTGAGATGTTGTATCGTGTAA 480 0.4375 MGSEGSTVVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDIFMQSWTGTIIGPPGTVHEGRIYQLKLFCGKDYPDNPPSVRFQTRINMTCVNQESGVVEPNLFPMLASWKRESTMEDILLQLKKEMMSPQNRKLSQPPEGNEDGRIDQKGLVLRCCIV* 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g3785 159 Pfam Ubiquitin-conjugating enzyme 41 133 IPR000608 -
Mtr8g3785 159 Gene3D Ubiquitin Conjugating Enzyme 2 144 IPR016135 -
Mtr8g3785 159 MobiDBLite consensus disorder prediction 127 146 - -
Mtr8g3785 159 SMART ubc_7 14 158 - -
Mtr8g3785 159 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 11 159 IPR000608 -
Mtr8g3785 159 PANTHER UBIQUITIN-CONJUGATING ENZYME E2 VARIANT 1A-LIKE 8 144 - -
Mtr8g3785 159 PANTHER UBIQUITIN-CONJUGATING ENZYME E2 8 144 - -
Mtr8g3785 159 SUPERFAMILY UBC-like 8 142 IPR016135 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g3785 Mtr-Chr8 48414627 48419957 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g3785 8 48414627 48419957 Mtr8g3785 8 48414627 48419957 ECH