Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g2706 ATGGCTTTGCCTATATTGTTCTTGTTCTTGTTCTTGTTGGTTATTTTGCCAACAACAATTTGCCAACAACATCAACATAACAAATATGAAGAATGTATCAAACCATACACATGTGGTGAAGTATCCGGCATATACTATCCATTTTGGGGACAAAACAAACCAAGTTATTGTGGTAGCAACAATGAATTCAACCTTAAATGTGATTCTCATCATCAAAACACATCCATTCAAATTGGTTCACAACATTTCCATGTCTTACGTATTGATCAATTGGGTTACACCATGTCAATGTTTCGAAAAGGCCTTGTTTATGATCATTGTTCTTCTGCTTTAACCAACACTTCTTTAAACTTGAGTCATTTTCATTACATGCCTAATGTGAGGAACATCACTATTTTATACAACTGTCCTAATGGCATCAAGCTTCCAAATGGCATGAACGGTAGCACAAACTCGTTTTCGTGCAAGGAAGATGAGAACAAGCGTGCTTTATTTATGGATTCTGCAACTGCAGAGAGTATAAATTGTGAAGGAGTTCGTATTGAAGTTCAGGTAGCACAGAAAGCGAAGCTAGGTAGTGGAATTGAAGGGTTGAACAAAGCTTTGAGCGGTGGATTTGATGTGAGATATGTGTTTGATACTCAAGCATGCTTAAAATGCATTTTAAGTAATGGAACTTGTGGGGGAAATGATAAGAATAAATTTTCATGTTATTGTCCTGATGGAACTGAAGGTTTAGATTGTTCACATCTCCACGATAATCGATGGAATTCGAAAACAAAGGTTGCTGTAGGAGTTTCTGTTGTTGTGGTCAGTGCAATTGCAGTAGGCATTGGCTTCTACATCTATTATTATTGCAGAAAGAAGAAAAAGAATGTTCATGTAGTTTCATCTGCACGATCTCGGAGTGTATCTGGTTATAGTTCAGAAGATACTGAGAGGGGAAGTAGATACCGTGGAGTACACTTCTTCACCTATAGTGAACTTGAAAAGGCCACAAACTACTTTGATTCTACTAGAGCGCTAGGAGATGGAGGCTTTGGCACAGTATATTTTGGAACACTTCAGGACGGGCGTCTGGTTGCGGTGAAACGCATGAATGAAAACAACTATAGGAGAGTTGAGCAATTTGTGAATGAAGTTGAGATTTTAACAGGACTACACCATCAAAATCTTGTGTCACTATATGGGTGCACTTCGCGCCATAGTCAAGAACTACTGCTTGTATATGAATATGTTCCTAATGGAACTGTTGCTGATCACCTTCATGGTAAAAAAGCAAAACCTGGCATGCTACCTTGGCATATCCGAATGAATATTGCCATAGAAACAGCTAGTGCATTAGTTTATCTTCATGCCTCTGACATCATCCATAGAGATGTGAAAACAAACAACATTCTACTAGACAATCATTTTAGCGTCAAAGTAGCAGATTTTGGACTTTCGCGTCTATTTCCAATCCATGTCACACACATTTCAACTGCTCCACAAGGGACTCCTGGTTATGTGGATCCGGAATACCATTTGTACTATCAGCTTACCGATAAAAGCGATGTTTTTAGCTTCGGAGTTGTGCTGATTGAGCTAATATCGTCCATGCCTGCTGTTGATATCACAAGGCATAGACAAGAAATCAATTTGTCTAACATGGCTATTAAGAAAATTCAAAATGGGACACTGCATGAACTTGTTGACCCTACACTTAGTTTTGAATCAGATTTCAAAGTAAGGAAAATGATAAATGCAGTGGCAGAGTTAGCATTTCAGTGTTTGCAGAGTTCTAAAGATGTTAGACCTTCTATGGTAGAAGTGATGGAAAGGCTTAAGGATATTCAGAGTGATGGGAAATATAAATGTAAACCTGAGGTGTTGGATATCTCAGGAGATGATGATACCACTTTGATAAAAATTGATCCGCCACCATCGTCACCAGATTCAAATTTAGCAAGCTTATCTATTCCGTCATATACTAATACCGATATATAA 1986 0.3812 MALPILFLFLFLLVILPTTICQQHQHNKYEECIKPYTCGEVSGIYYPFWGQNKPSYCGSNNEFNLKCDSHHQNTSIQIGSQHFHVLRIDQLGYTMSMFRKGLVYDHCSSALTNTSLNLSHFHYMPNVRNITILYNCPNGIKLPNGMNGSTNSFSCKEDENKRALFMDSATAESINCEGVRIEVQVAQKAKLGSGIEGLNKALSGGFDVRYVFDTQACLKCILSNGTCGGNDKNKFSCYCPDGTEGLDCSHLHDNRWNSKTKVAVGVSVVVVSAIAVGIGFYIYYYCRKKKKNVHVVSSARSRSVSGYSSEDTERGSRYRGVHFFTYSELEKATNYFDSTRALGDGGFGTVYFGTLQDGRLVAVKRMNENNYRRVEQFVNEVEILTGLHHQNLVSLYGCTSRHSQELLLVYEYVPNGTVADHLHGKKAKPGMLPWHIRMNIAIETASALVYLHASDIIHRDVKTNNILLDNHFSVKVADFGLSRLFPIHVTHISTAPQGTPGYVDPEYHLYYQLTDKSDVFSFGVVLIELISSMPAVDITRHRQEINLSNMAIKKIQNGTLHELVDPTLSFESDFKVRKMINAVAELAFQCLQSSKDVRPSMVEVMERLKDIQSDGKYKCKPEVLDISGDDDTTLIKIDPPPSSPDSNLASLSIPSYTNTDI* 662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g2706 661 ProSitePatterns Protein kinases ATP-binding region signature. 342 364 IPR017441 GO:0005524
Mtr8g2706 661 SMART serkin_6 336 609 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g2706 661 Pfam Wall-associated receptor kinase C-terminal 161 242 IPR032872 -
Mtr8g2706 661 ProSitePatterns EGF-like domain signature 1. 237 248 IPR000742 -
Mtr8g2706 661 MobiDBLite consensus disorder prediction 638 661 - -
Mtr8g2706 661 SUPERFAMILY Protein kinase-like (PK-like) 316 608 IPR011009 -
Mtr8g2706 661 Gene3D Phosphorylase Kinase; domain 1 307 412 - -
Mtr8g2706 661 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.2 7 648 - -
Mtr8g2706 661 Pfam Protein kinase domain 338 606 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g2706 661 ProSiteProfiles Protein kinase domain profile. 336 611 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g2706 661 Pfam Wall-associated receptor kinase galacturonan-binding 35 97 IPR025287 GO:0030247
Mtr8g2706 661 MobiDBLite consensus disorder prediction 639 661 - -
Mtr8g2706 661 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 7 648 IPR044652 -
Mtr8g2706 661 ProSitePatterns Serine/Threonine protein kinases active-site signature. 456 468 IPR008271 GO:0004672|GO:0006468
Mtr8g2706 661 Gene3D Transferase(Phosphotransferase) domain 1 413 622 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g2706 Mtr-Chr8 37700551 37703621 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g2706 34 651 Receptor kinase-like Gene Family AT1G25390 42.765 1.37e-142 427
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Mtr8g2706 Pkinase 3.3e-47 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g2706 8 37700551 37703621 Mtr8g2706 8 37700551 37703621 ECH