Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g2703 ATGATTGCTGGGAAAGATCTTCGTAATGGTGTTACTGATTCTGATGGTGAAAACTCCAGAAGCAAGTTATCAAGACCCAATTTTGATCCAAACAAACGTTACCCAGATGATAAAGATGCTGTTTTTCTGAGAGATTCTGAGATGGGTGGTGGTCGTGCTGGTGGGTCCAACCAGGTTTCTGGTGGTAACTCAGGTTTTCAAGAATTGACCCTGAGTTATCTCTGTGGAAATCCAAGATTGAAAGAGATTCAAGGTGAAAGCTTTCTGAGTCAAAAGGGTAAAGAGGTTATGGTTTCTGAGAATTCAAATCAAGATGGAGGAAAATGGGTTGAAAGAGATTTTCTTAGTTTGAGTGATTCTTCAAAGAGATCTATTGAAGATGATGGTGAAAGAGAGAGTAATATTAGGGATAAGAGACCAAAGGTTCAGACACTGGATCTTTCTCTTGGTTTACCTGATGTTTCTCTTTCTCTTACTGCTTCAAATGCTTTTCAACTCAATGGTGATCATCAACAACCTTTTAAAGTTAAACCTAGCAGGCCTTCAACTACTCATACTTCTTATTCAAATGATTATACAGCACCTTTGTCTCATTCTTATTCAAACGCCTTTTCATTTTCAAATGCTTTTTCACATAATCCAAGTTGTTCTTTAACTCGTAATTCAACGGATAATTTTGATTATTCCGCGAGTAAAGACGATCAAATTTGGAACTGTGGTGAAGGGACTAATGGTTCTGTGCATAGCAGGTTTAAGCCAATTGGTGATGGTATTGTTGCTTTGGCAAATCCCGGAAATGGAACTGGTGTTAGTTCATTTATGCAACCAGGTAATAGTAGTCATTATAAGACGACTAGTTCTGAAAACCATTCTTTTTTTCCTTCTGAATTGCCTGCTAGACATAGGTTTGAGACTCATTCAGGGGATTCAAGGGGAAGAAATTCTGAGAGTATGAGGGGTTTTGAAGGTGTAGATGGTGGTGGAAATAGGAATCTTTCAAAACCAGAGAGGATTGTTAGGGAAATTATTTGGGAGTCTGTTCCTATTTTTTCATTGACAATTCAGGAGCTTGCCGAGGAAGTTGTCACATCAACTAAGGAGTACTTAAAGAATCTTATTGAGACCAAGAAAGAAGAATTGGTCAACCTTCAAAGCAGGCTTGAGAGAAGGTCCGATCTTTCTAAAGAGACGCTTTCGAAGGGCACTAAAGTTCAGTTGGAGATTCTAGTTGCTGTAAAGATGGGACTGTCCAGCTTCTTGTACGGTAATCTTCAGCTATCTGAGTTGGTAGAGGTTTTCTTGTATAGGAGGTGTAGAAATGTTACCTGCAAGAGTTTGCTTCCTGTTGATGATTGTGACTGTAAGATTTGCTCGGGAAACAAAGGGTTTTGTAGCTCTTGTATGTGTCCTATTTGTTTGAACTTTGATTGTGCAAGTAATACTTGTAGTTGGATTGGATGTGATGTTTGTTCACACTGGTGCCATGCTGTTTGTGGCATCCAGAAGAAGCTCATCAAACCGGGACCGAGCTTGAAAGGACCTTCTGGTACCACGGAAATACAGTTTCATTGTATTGGATGTGAACATGCATCGGAAATGTTTGGATTTGTTAAAGATGTGTTCATGTCTTGTGCAAAGGATTGGGGGCTTGAAACCTTGTTGAAAGAGCTTGATTGTGTGAGGAGGATTTTCATGGGAAGTGAGGATTGCAAAGGGAAGGAACTGCATTTGAAAACCGATGGCTTGCTATTAAAGCTTCAAGCTAAAATAGTATCTCCTTCAGAAGCCTGCAATCAGATCATGCAATTTTTCAACTATGCGGAAAACATGGCAAACTTTCCGGCTTCTGTTTTCTCTTCAAAGGAATTGATAACCTCTCAATCCAGCCTTCCAAAGGACACACTGTCTCTTCCAAAATCTAGTTCTTCAATACCGAACTACGCCTATGAGTCGAGCTATTCTACTAGGCCACATTCCGGTGCCCCATCCAAAGAGCTTCATCAGAAAGACCTCAAGGATAGCATCTTTAGCGAACTAAAAAATGACGATGATCTTCAATTAGCGGCTTTACTAAGCAAAGGTGGAATTGAAAGTTTGGAGAGCATTGTTCGGATAAAGGAGGCAGAAGCGAAAATGTTCCAAACCAAGGCAGATGAAGCAAGGAGGGCGGCAGAAGGGTTCCAGAAGATGATTAGGACAAAGACTGCACAGATGGATGAAGAGTATGCGACAAAGCTTTCAAAACTGTGTCTGAATGATACCGAGGAAACGCAGAGGAGGAAATTGGATGAAATGAAAGTTGTGGAAAATTCTTGTGTTGATTACTATAAAATGAAAAAGAAAATGCAAGATGAAATTGATGGTTTGTTGGCGAGAATGGAGGCAACAAAGCAGCATTGGGTTTAA 2406 0.4002 MIAGKDLRNGVTDSDGENSRSKLSRPNFDPNKRYPDDKDAVFLRDSEMGGGRAGGSNQVSGGNSGFQELTLSYLCGNPRLKEIQGESFLSQKGKEVMVSENSNQDGGKWVERDFLSLSDSSKRSIEDDGERESNIRDKRPKVQTLDLSLGLPDVSLSLTASNAFQLNGDHQQPFKVKPSRPSTTHTSYSNDYTAPLSHSYSNAFSFSNAFSHNPSCSLTRNSTDNFDYSASKDDQIWNCGEGTNGSVHSRFKPIGDGIVALANPGNGTGVSSFMQPGNSSHYKTTSSENHSFFPSELPARHRFETHSGDSRGRNSESMRGFEGVDGGGNRNLSKPERIVREIIWESVPIFSLTIQELAEEVVTSTKEYLKNLIETKKEELVNLQSRLERRSDLSKETLSKGTKVQLEILVAVKMGLSSFLYGNLQLSELVEVFLYRRCRNVTCKSLLPVDDCDCKICSGNKGFCSSCMCPICLNFDCASNTCSWIGCDVCSHWCHAVCGIQKKLIKPGPSLKGPSGTTEIQFHCIGCEHASEMFGFVKDVFMSCAKDWGLETLLKELDCVRRIFMGSEDCKGKELHLKTDGLLLKLQAKIVSPSEACNQIMQFFNYAENMANFPASVFSSKELITSQSSLPKDTLSLPKSSSSIPNYAYESSYSTRPHSGAPSKELHQKDLKDSIFSELKNDDDLQLAALLSKGGIESLESIVRIKEAEAKMFQTKADEARRAAEGFQKMIRTKTAQMDEEYATKLSKLCLNDTEETQRRKLDEMKVVENSCVDYYKMKKKMQDEIDGLLARMEATKQHWV* 802
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g2703 801 Coils Coil 366 393 - -
Mtr8g2703 801 MobiDBLite consensus disorder prediction 303 330 - -
Mtr8g2703 801 MobiDBLite consensus disorder prediction 1 62 - -
Mtr8g2703 801 MobiDBLite consensus disorder prediction 169 188 - -
Mtr8g2703 801 MobiDBLite consensus disorder prediction 303 318 - -
Mtr8g2703 801 Pfam Coiled-coil region of Oberon 665 790 IPR032535 -
Mtr8g2703 801 PANTHER PROTEIN OBERON 3 1 801 - -
Mtr8g2703 801 MobiDBLite consensus disorder prediction 10 45 - -
Mtr8g2703 801 PANTHER VERNALIZATION-INSENSITIVE PROTEIN 3 1 801 IPR004082 -
Mtr8g2703 801 Coils Coil 779 799 - -
Mtr8g2703 801 Pfam PHD - plant homeodomain finger protein 438 562 IPR032881 -
Mtr8g2703 801 CDD PHD_OBE1_like 468 527 - -
Mtr8g2703 801 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 353 375 IPR004082 -
Mtr8g2703 801 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 429 450 IPR004082 -
Mtr8g2703 801 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 475 495 IPR004082 -
Mtr8g2703 801 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 548 567 IPR004082 -
Mtr8g2703 801 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 697 717 IPR004082 -
Mtr8g2703 801 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 736 758 IPR004082 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g2703 Mtr-Chr8 37662436 37666338 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g2703 438 535 PHD Gene Family AT5G57380 28.571 7.21e-07 50.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g2703 8 37662436 37666338 Mtr8g2703 8 37662436 37666338 ECH