Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g2670 ATGAGGGTTTTGAAAAAAGCAACAGGAGTTATCAAAGACAAGAACAGCATTTGGGTAGCAAAGTTCTCAAGAAAGGGTTCATGGCGCAATGCTGATCTTGAAACCATTGTAATCAAAGCAACAAGCCACGATGAAAACCGTATCGATTGTAAGAACGTTCAGAGGGTTTTCAAATGGTTAAAAGTATCTCCTCTTTATTTGAAACCTATTGTTTGGGCTCTATCTATGAGAATGCAAAAAACTAAGAGTTGGGTTGTGGCCATTAAAGGTTTAATGCTCATTCATGGCATTTTCTGCATTGGTATCCCTTCGGTACAAAAAATGGGTAGGTTACCATTTGATTTATCAAACTTCAATGATGCGCATTTGAATCCTTCAAAAGCTTGGGGTGTTAATGCTTTTGTACGTTCTTATTTTGCTTATTTGGATCAAAAGTCGGCTTTTGTTTCCTCCGAGCTTAAGAATTTGGCGAAGAACAATAACAAGGATGTGGAAGTTGAAGAGACGTTGATGGAAGAGCTTGAGAAGTTGCAAAAGTTGCAAATAATGATTGACATGCTTTTACAAATCAAACCAAGGCATATGAACAACAATATGAATGTTGCTCTTATTCTGGAAGCAATGGATTGCATCATTGTTGAGGTTTTTGATGTTTATAGTAAGTTTTGTGACAGGATTGCAGGGGTTTTGTTGAGAATATACGATGTTGGTGGAAAAATGGAAGCTTGTGTTGGGTTAAAGGTTTTGAAAAAAGCAATTGTTCAAGGGGAAAAATTGGCTTATTATATTGAGGTTTGTAGAGATATCGGTGTCCTTAACGCTTCTCAATGTCCTGAGATTGAAAGAATCTCTGAAGAAGATATTCAAGATCTTGAGAGGATAATTAGTGGTGCTTATTCAGCTAAGAAAAGCTTGGAGGGTGCTAATGATGGTGTTGAAAATGAGAATCAAGACAAGTCCATTGTTGTAAGAGATTGCTTGCAGCTCAAGGAATCAAAAAATGGTTTGACAACAGTGATTACTCACCAATGGGAGGTATTTTATGATGACATATTGGTTGATGATGTTAAAGGAAATAGTGTCATCAATGGAGAAAAGGGTAACATTTTCATAACAACCAACCCCTTTGAGGAATCATATAGCATGGTACCTTATTGTCATGTTCAAGTTAATCACCAAGTTCTTCCTGACCTAATTAGTTTATAG 1206 0.3657 MRVLKKATGVIKDKNSIWVAKFSRKGSWRNADLETIVIKATSHDENRIDCKNVQRVFKWLKVSPLYLKPIVWALSMRMQKTKSWVVAIKGLMLIHGIFCIGIPSVQKMGRLPFDLSNFNDAHLNPSKAWGVNAFVRSYFAYLDQKSAFVSSELKNLAKNNNKDVEVEETLMEELEKLQKLQIMIDMLLQIKPRHMNNNMNVALILEAMDCIIVEVFDVYSKFCDRIAGVLLRIYDVGGKMEACVGLKVLKKAIVQGEKLAYYIEVCRDIGVLNASQCPEIERISEEDIQDLERIISGAYSAKKSLEGANDGVENENQDKSIVVRDCLQLKESKNGLTTVITHQWEVFYDDILVDDVKGNSVINGEKGNIFITTNPFEESYSMVPYCHVQVNHQVLPDLISL* 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g2670 401 Pfam ANTH domain 32 295 IPR011417 GO:0005543
Mtr8g2670 401 PANTHER CLATHRIN ASSEMBLY PROTEIN 1 399 IPR045192 GO:0048268|GO:0072583
Mtr8g2670 401 CDD ANTH_N_AP180_plant 33 148 - -
Mtr8g2670 401 SUPERFAMILY GAT-like domain 172 296 - -
Mtr8g2670 401 PANTHER OS08G0467300 PROTEIN 1 399 - -
Mtr8g2670 401 ProSiteProfiles ENTH domain profile. 25 156 IPR013809 -
Mtr8g2670 401 Gene3D ANTH domain 154 307 IPR014712 GO:0005545|GO:0030136|GO:0030276|GO:0048268
Mtr8g2670 401 Coils Coil 157 177 - -
Mtr8g2670 401 SUPERFAMILY ENTH/VHS domain 32 148 IPR008942 -
Mtr8g2670 401 Gene3D - 3 151 IPR008942 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g2670 Mtr-Chr8 37357706 37359409 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g2670 8 37357706 37359409 Mtr8g2670 8 37357706 37359409 ECH