Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g2669 ATGGATGATGATGTGCTGAATATGCCCAATTGGGGTTACTATGAACCCTTCAAGGGGGGGAATCTCGGTCTGAACCTCATGCCTGCCATGAATGATCGTGAAACAAAACCATTTTTTCCTGGTCGTGATCCAGCTATGATAGGAAGTGCAAATGGGCCCTTGCCCTTTCAGCCACGAGGCTGTGCTGTTTCGGAGTCTGCTACTCCGTTTAACTATGTGAGGGATAACTGGATGACCCCGAGACATAGGTTTATCAATATGCAGCTGACAAATCCAAACTATGCTGTTATTCCAGAAGCATCACAAGCACTCTCCTTGCCGGTTATACCGCAGCCTGATGCATCAAGAAACGAGAATGTGGAGAATGCTGAAGAATTGAGTGTTAAGAAGGAAGGTGGCAAGTCGAAGAAAAGGAAGTCTAAGGGTGTTGTTACCACTCCAAAAGCCAAAAAGCCCAGGAAGCCGAAGGATGATAGCAGTGTTTCAGCTCAAGGTGTGAAACCACCAAAGAAGACTTTGGCACTTGAAATCAATGGAATTGAAATGGACATTTCTGGTCTACCAGTTCCAGTGTGTTCTTGCACTGGGAATCCTCAGCAGTGTTATCGCTGGGGCGTTGGAGGCTGGCAATCAGCTTGCTGTACCACAAATGTGTCAATTTATCCTTTGCCGATGAGCATAAAAAGGCGTGGCGCAAGGATAGCTGGGAGGAAAATGAGCCAAGGGGCTTTTAAGAAGGTCCTGGAAAAACTTGCTGCTGAAGGTTATAATTTTGCTAATTCTATTGATCTGAAGACTCATTGGGCTAGACATGGCACCAACAAGTTTGTCACTATCAGATAG 843 0.4579 MDDDVLNMPNWGYYEPFKGGNLGLNLMPAMNDRETKPFFPGRDPAMIGSANGPLPFQPRGCAVSESATPFNYVRDNWMTPRHRFINMQLTNPNYAVIPEASQALSLPVIPQPDASRNENVENAEELSVKKEGGKSKKRKSKGVVTTPKAKKPRKPKDDSSVSAQGVKPPKKTLALEINGIEMDISGLPVPVCSCTGNPQQCYRWGVGGWQSACCTTNVSIYPLPMSIKRRGARIAGRKMSQGAFKKVLEKLAAEGYNFANSIDLKTHWARHGTNKFVTIR* 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g2669 280 PANTHER - 1 280 IPR010409 -
Mtr8g2669 280 SMART GAGA_bind_2 1 280 IPR010409 -
Mtr8g2669 280 PANTHER PROTEIN BASIC PENTACYSTEINE2-LIKE 1 280 - -
Mtr8g2669 280 MobiDBLite consensus disorder prediction 118 132 - -
Mtr8g2669 280 MobiDBLite consensus disorder prediction 110 167 - -
Mtr8g2669 280 MobiDBLite consensus disorder prediction 133 149 - -
Mtr8g2669 280 Pfam GAGA binding protein-like family 1 280 IPR010409 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g2669 Mtr-Chr8 37354214 37356163 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g2669 1 280 BBR or BPC Transcription factor family AT2G01930 54.545 5.51e-96 282
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BBR-BPC Mtr8g2669 GAGA_bind 2e-95 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g2669 8 37354214 37356163 Mtr8g2669 8 37354214 37356163 ECH