Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g1660 ATGACCGGCAAAGAAATCCTCCACAAGATGAAGGAGAAAGTTTTGGGACCATCTGATCCAGACTCTGGGAAAGGAAAGAGCAAGATGTCAAAGCATGTAACTCATGGCTTTCACTTGGTAAAGGGTAAATCAGTTCATGCCATGGAAGACTATGTGGTTGCTGAATTCAAGCATGTTGATGACAACGAGTTGGGTTTATTTGCAATATTTGATGGTCACGCAGGTCATACTGTAGCGGATTACTTGCGTTCTAATCTGTTTGATAATATCTTAAAAGAGCCTGATTTCTGGACTGAACCTGTGGATAGTGTGAAGAGAGCATATAAAGAAACTGATTCTACTATTTTAGAGAAATCAGGTGAATTGGGTAAAGGAGGTTCAACTGCAGTTACAGCAATACTAATTAATTGTCAGAAGCTAGTGGTGGCCAATATCGGGGATTCTCGGGCTGTCTTATCTGAGAATGGTGTTGCTATACCACTGTCGGTTGACCATGAACCAACAACAGAAAGCAATGATATAAAAAACAGAGGTGGTTTTGTATCTAACTTTCCAGGGGATGTTCCACGGGTTGATGGACAGTTAGCAGTGTCAAGGGCATTTGGCGACAAAAGCCTAAAGATACACATGACTTCAGAACCGCATGTGACAGTAAAGATGATAGATGACGGTGGAGAGTTCGTTATATTAGCCAGTGACGGGTTATGGAAGGTCATGTCAAATCAAGAAGCAGTGGATGCAATCAAAGATATCAAAGATGCTCGGTCTGCAGCAAAGCATCTTACTGAAGAAGCGCTTAACAGGAGGAGCTCAGATGACATCTCTTGCATTGTTGTGAGGTTTCACTGA 849 0.4205 MTGKEILHKMKEKVLGPSDPDSGKGKSKMSKHVTHGFHLVKGKSVHAMEDYVVAEFKHVDDNELGLFAIFDGHAGHTVADYLRSNLFDNILKEPDFWTEPVDSVKRAYKETDSTILEKSGELGKGGSTAVTAILINCQKLVVANIGDSRAVLSENGVAIPLSVDHEPTTESNDIKNRGGFVSNFPGDVPRVDGQLAVSRAFGDKSLKIHMTSEPHVTVKMIDDGGEFVILASDGLWKVMSNQEAVDAIKDIKDARSAAKHLTEEALNRRSSDDISCIVVRFH* 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g1660 282 ProSiteProfiles PPM-type phosphatase domain profile. 34 281 IPR001932 -
Mtr8g1660 282 MobiDBLite consensus disorder prediction 8 29 - -
Mtr8g1660 282 Pfam Protein phosphatase 2C 46 274 IPR001932 -
Mtr8g1660 282 ProSitePatterns PPM-type phosphatase domain signature. 66 74 IPR000222 GO:0043169
Mtr8g1660 282 Coils Coil 244 264 - -
Mtr8g1660 282 SMART PP2C_SIG_2 43 281 IPR001932 -
Mtr8g1660 282 PANTHER PROTEIN PHOSPHATASE 2C 39-RELATED 1 281 - -
Mtr8g1660 282 Gene3D - 25 282 IPR036457 -
Mtr8g1660 282 PANTHER PROTEIN PHOSPHATASE 2C 1 281 IPR015655 GO:0004722|GO:0006470
Mtr8g1660 282 CDD PP2Cc 35 281 IPR001932 -
Mtr8g1660 282 SUPERFAMILY PP2C-like 30 282 IPR036457 -
Mtr8g1660 282 SMART PP2C_4 30 279 IPR001932 -
Mtr8g1660 282 MobiDBLite consensus disorder prediction 8 28 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g1660 Mtr-Chr8 24462671 24466196 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g1660 1 282 PP2C-type Phosphatase Gene Family AT3G15260 74.048 1.51e-158 441