Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g2619 ATGGACATTCTTGTTTTCATGATTTTTGTTTCCTATTTACTTGCTCACTCTTTCAAACTTTCCATAGCAGCTGATTCTCTTGGTTTGTCACAATCCATCAGCAATAATAATAATACCTTGGTGTCCCAAAATGGAAGATATGAACTTGGTTTCTTCACTCCAGGTAACTCTAACAAAACTTACCTTGGTATTTGGTACAAAAACATTCCTGTTCAAAAATTTGTTTGGGTTGCAAACAGAAACAATCCCATCAATAGTACTTCAAACCATGCACTATTTCTCAACAGCACAGGCAACCTTGTTCTTACTCAAAATAACTCCTTTGTTTGGTACACAACAACCAATCAAAAGCAAGTACATAATCCTGTAGCAGTGCTGTTAGACAGTGGAAATCTTGTGGTAAAAAATGATGGAGAAACAAACCAAGATGAGTATTTATGGCAAAGCTTTGATTATCCATCAGATACCCTTTTAGATGGGATGAAATTGGGAAGGAATCTAAGAAATGGTCTTGATTGGAAGTTAACGTCTTGGAAGAGTCCAGAAGATCCATCTGTAGGAGATGTTTCTTGGGGTTTAGTACTGAATAATTATCCTGAGTATTATATGATGAAAGGAAATGATAAAATTTTCAGGCTTGGACCATGGAATGGTTTACACTTTAGTGCATTACCAGAACAAGTTTCAAACCCTTTTTTGAATTATGAGTATGTTTCCAACGATGACGAAATCTTCTTTAGATATAGCATCAAGATCAATTCTGTTATCTCAAAAGTAGTTGTAGACCAAACAAAACAACATCGATACGTATGGAATGAACAAGAACATAAATGGAAGATATATATAACAATGCCTAAAGACTTATGTGACAGTTATGGTCTTTGTGGACCTTATGGAAATTGCATGATGACCCAACAACAGGTTTGTCAATGTTTTAATGGTTTTAGTCCAAAGTCACCACAAGCATGGATTGCATCTGATTGGAGTCAAGGATGTGTGCGCGATAAACATTTGAGTTGCAATCGCAATCACACAAATAAAGATGGGTTTGTCAAATTTCAAGGCCTAAAAGTTCCAGATACTACACATACTTTGTTGAATGTTACTATGAGTATTGAGGAATGCAGAGAAAAATGTTTGAACAATTGTTCTTGTATGGCTTATACAAATTCAAACATAAGTGGAGAAGGGAGCGGTTGTGTTATGTGGTTTGGTGATCTAATTGACATAAGACAGTTTCAAGAAGGTGGACAAGATCTCTATATTCGGATGTTTGGTGCAGAGCTAGACAACATTGAAGAACCTGGACATAGACACAAAAGGAACTGGAGAACGGCCAAAGTAGCTTCGGCTGTTATTTTAAGTTGCGGGGTGATTTTGGTGTGCATTTATTTCATCTTCAGAAACCAGAGGAAGACTGTAGATAAACAACCAGACAAATCTGAAAGGCATGTAGATGATCTTGATCTGCCATTGTTTGATCTGCCAACAATTTCCACTGCAACTAATGGCTTCTCAAGAAACAATAAAATTGGCGAAGGTGGTTTTGGAACTGTGTATAAGGGAAAACTAGCCAATGATCAAGAAATTGCAGTTAAGAGACTTTCAAGCATCTCGGGACAAGGAATGACCGAGTTCATAAATGAAGTAAAGCTAATTGCAAAACTTCAACACCGAAATCTAGTAAAGCTGCTAGGTTGTTGCATTCAAGGACAACAGATGTTGATTTACGAATACATGGTTAATGGTAGCCTGGACTCCTTCATTTTTGACAATGACAAGAGTAAATTGCTAGATTGGTCAAAGCGGTTCCATATAATTTGCGGAATTGCAAGAGGGCTCGTGTATCTTCACCAAGATTCCCGATTAAGGATTATCCATAGAGATCTCAAAGCAAGTAATGTTTTACTCGACGATAATTTGAATCCAAAAATATCAGATTTTGGAACAGCTAGAACTTTCGGAGGAGACCAATTCGAAGGAAACACAAAGAGAATAATTGGAACTTATGGGTACATGGCACCAGAATATGCTGTTGATGGATTATTTTCGGTGAAATCTGACGTTTTTAGCTTCGGCATTTTATTATTGGAGATTATATGTGGCAAAAGAAATAGAGCATATTATCACACAGATGGTACTCTTAACCTTGTTGGCCAAGCATGGGCAGCGTGGAAAGAGGACAGGGCTTTAGGTTTGACCGACTCAAACATTGATGAGACGTATGTTGTATCAGAAGTATTGCGTTGTATGCACATTAGTCTCCTGTGTGTACAGCAGAATCCTGAAGATAGGCCGACCATGGCTTCTGTAATTCTAATGTTGGGGAGTTCTGAGAAGGAATTAGGAGAACCTAAAGAACCTGGTTTCATTTCCAAAAATGTTTCATCTGAAACAAATTCAATCACAAATCCAAAGGGTTGTTGTAGTTCAGTAAATGAAGTGACCATTTCCTTATTAGATGCTCGATGA 2472 0.3734 MDILVFMIFVSYLLAHSFKLSIAADSLGLSQSISNNNNTLVSQNGRYELGFFTPGNSNKTYLGIWYKNIPVQKFVWVANRNNPINSTSNHALFLNSTGNLVLTQNNSFVWYTTTNQKQVHNPVAVLLDSGNLVVKNDGETNQDEYLWQSFDYPSDTLLDGMKLGRNLRNGLDWKLTSWKSPEDPSVGDVSWGLVLNNYPEYYMMKGNDKIFRLGPWNGLHFSALPEQVSNPFLNYEYVSNDDEIFFRYSIKINSVISKVVVDQTKQHRYVWNEQEHKWKIYITMPKDLCDSYGLCGPYGNCMMTQQQVCQCFNGFSPKSPQAWIASDWSQGCVRDKHLSCNRNHTNKDGFVKFQGLKVPDTTHTLLNVTMSIEECREKCLNNCSCMAYTNSNISGEGSGCVMWFGDLIDIRQFQEGGQDLYIRMFGAELDNIEEPGHRHKRNWRTAKVASAVILSCGVILVCIYFIFRNQRKTVDKQPDKSERHVDDLDLPLFDLPTISTATNGFSRNNKIGEGGFGTVYKGKLANDQEIAVKRLSSISGQGMTEFINEVKLIAKLQHRNLVKLLGCCIQGQQMLIYEYMVNGSLDSFIFDNDKSKLLDWSKRFHIICGIARGLVYLHQDSRLRIIHRDLKASNVLLDDNLNPKISDFGTARTFGGDQFEGNTKRIIGTYGYMAPEYAVDGLFSVKSDVFSFGILLLEIICGKRNRAYYHTDGTLNLVGQAWAAWKEDRALGLTDSNIDETYVVSEVLRCMHISLLCVQQNPEDRPTMASVILMLGSSEKELGEPKEPGFISKNVSSETNSITNPKGCCSSVNEVTISLLDAR* 824
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g2619 823 SMART blect_4 31 153 IPR001480 -
Mtr4g2619 823 ProSitePatterns Serine/Threonine protein kinases active-site signature. 625 637 IPR008271 GO:0004672|GO:0006468
Mtr4g2619 823 CDD PAN_AP_plant 337 423 - -
Mtr4g2619 823 ProSiteProfiles EGF-like domain profile. 285 321 IPR000742 -
Mtr4g2619 823 Gene3D Hepatocyte Growth Factor 341 422 - -
Mtr4g2619 823 Gene3D Phosphorylase Kinase; domain 1 479 579 - -
Mtr4g2619 823 CDD STKc_IRAK 511 775 - -
Mtr4g2619 823 ProSiteProfiles Protein kinase domain profile. 505 790 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g2619 823 SMART serkin_6 505 775 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g2619 823 CDD B_lectin 33 153 IPR001480 -
Mtr4g2619 823 Pfam S-locus glycoprotein domain 211 319 IPR000858 GO:0048544
Mtr4g2619 823 Pfam Domain of unknown function (DUF3403) 777 823 IPR021820 GO:0004674
Mtr4g2619 823 Pfam PAN-like domain 344 410 IPR003609 -
Mtr4g2619 823 ProSitePatterns Protein kinases ATP-binding region signature. 511 533 IPR017441 GO:0005524
Mtr4g2619 823 PANTHER - 27 820 - -
Mtr4g2619 823 Pfam Protein tyrosine and serine/threonine kinase 508 772 IPR001245 GO:0004672|GO:0006468
Mtr4g2619 823 Gene3D - 19 150 IPR036426 -
Mtr4g2619 823 SMART ntp_6 345 424 IPR003609 -
Mtr4g2619 823 Pfam D-mannose binding lectin 74 179 IPR001480 -
Mtr4g2619 823 ProSiteProfiles Bulb-type lectin domain profile. 24 147 IPR001480 -
Mtr4g2619 823 PIRSF SRK 1 823 IPR024171 GO:0004674
Mtr4g2619 823 ProSiteProfiles PAN/Apple domain profile. 340 425 IPR003609 -
Mtr4g2619 823 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 27 820 - -
Mtr4g2619 823 SUPERFAMILY alpha-D-mannose-specific plant lectins 74 184 IPR036426 -
Mtr4g2619 823 SUPERFAMILY Protein kinase-like (PK-like) 485 775 IPR011009 -
Mtr4g2619 823 Gene3D Transferase(Phosphotransferase) domain 1 580 789 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g2619 Mtr-Chr4 39686596 39690228 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g2619 458 794 Receptor kinase-like Gene Family AT4G23190 53.666 1.32e-121 377
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mtr4g2619 PK_Tyr_Ser-Thr 6e-50 CL0016