Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g4297 ATGCCTACACTGGTTGTACCTCCATTTCCCCCTTCTCCTAGAGATGATGCGATGCAACTTTACCGTGCTTTCAAAGGATTTGGCTGTGACACAAATGCTGTGATCAACATTCTTGCTCATCGAGATGCGACACAGCGTGCCTACATCCAACAAGAATATCGGACTACATACTCGGAGGAGCTTTCAAAAAGCTTGGTTTCGAAGCTGAGCGGAAAGTTGGAGACTGCTGTTCTACTTTGGATGCCTGACCATGCAGGACGTGATGTGGAAATCATCAGGAAGTCACTAGTTGTGGATAGAAACCTTGAAGCTGCTACCGAAGTAATCTGTTCGCGCACTCCATCCCAACTACAATATCTAAAACAGTTATACCATTCAAAGTTTGGTGTTTATCTCGAGCATGAAGTGAAATCAAACACTTCCGGGGATCTTCAAAAGATTTTGCTTGCATATGTAAGCACCCCTCGCCATGAAGGTCCCGAGGTTAATAGAGAAATTGCTGAGAAGGATGCAAAAGTTCTCTACAAAGCGGGTGAAAAGAAACTCGGAACTGATGAAAAGACTTTTGTCCAAATATTCAGTGAAAGGAGTGCCGCACATTTGGCTGCAATCAGTTCTTATTATCATGACATGTATGGTCACTCATTGAAGAAGGCAGTAAGGAATGAAGCTTCAGGGAATTTCGGTAACGCACTTTTGACAATAATTCAGTGTGCTACTAATCCAGGAAAGTATTTTGCAAAGGTGTTGTATAAGGCAATGAAAGGTTTAGGGACTAATGATGATACACTGATAAGGGTAATTATAACAAGGACTGAGATTGATATGGAATATATCAAAGCTGAATATGCAAAGAAATACAAAAAGACATTGAATGATGCAGTTCACTCTGAAACATCTGGCAACTACAGGACTTTTCTTCTTGCACTTTTGGGTCCCAATCATTAG 948 0.4135 MPTLVVPPFPPSPRDDAMQLYRAFKGFGCDTNAVINILAHRDATQRAYIQQEYRTTYSEELSKSLVSKLSGKLETAVLLWMPDHAGRDVEIIRKSLVVDRNLEAATEVICSRTPSQLQYLKQLYHSKFGVYLEHEVKSNTSGDLQKILLAYVSTPRHEGPEVNREIAEKDAKVLYKAGEKKLGTDEKTFVQIFSERSAAHLAAISSYYHDMYGHSLKKAVRNEASGNFGNALLTIIQCATNPGKYFAKVLYKAMKGLGTNDDTLIRVIITRTEIDMEYIKAEYAKKYKKTLNDAVHSETSGNYRTFLLALLGPNH* 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g4297 315 ProSitePatterns Annexin repeat signature. 258 310 IPR018252 GO:0005509|GO:0005544
Mtr1g4297 315 Gene3D Annexin 83 153 IPR037104 GO:0005509|GO:0005544
Mtr1g4297 315 PANTHER ANNEXIN 7 314 - -
Mtr1g4297 315 SMART annex3 258 310 IPR018502 GO:0005509|GO:0005544
Mtr1g4297 315 SMART annex3 99 151 IPR018502 GO:0005509|GO:0005544
Mtr1g4297 315 SMART annex3 28 80 IPR018502 GO:0005509|GO:0005544
Mtr1g4297 315 SMART annex3 183 235 IPR018502 GO:0005509|GO:0005544
Mtr1g4297 315 Gene3D Annexin 156 241 IPR037104 GO:0005509|GO:0005544
Mtr1g4297 315 Gene3D Annexin 1 82 IPR037104 GO:0005509|GO:0005544
Mtr1g4297 315 ProSiteProfiles Annexin repeat profile. 241 312 IPR018502 GO:0005509|GO:0005544
Mtr1g4297 315 Pfam Annexin 170 235 IPR018502 GO:0005509|GO:0005544
Mtr1g4297 315 Pfam Annexin 245 310 IPR018502 GO:0005509|GO:0005544
Mtr1g4297 315 Pfam Annexin 16 79 IPR018502 GO:0005509|GO:0005544
Mtr1g4297 315 Pfam Annexin 104 150 IPR018502 GO:0005509|GO:0005544
Mtr1g4297 315 PRINTS Annexin family signature 25 47 IPR001464 GO:0005509|GO:0005544
Mtr1g4297 315 PRINTS Annexin family signature 65 81 IPR001464 GO:0005509|GO:0005544
Mtr1g4297 315 PRINTS Annexin family signature 174 200 IPR001464 GO:0005509|GO:0005544
Mtr1g4297 315 PRINTS Annexin family signature 254 274 IPR001464 GO:0005509|GO:0005544
Mtr1g4297 315 PRINTS Annexin family signature 298 311 IPR001464 GO:0005509|GO:0005544
Mtr1g4297 315 ProSiteProfiles Annexin repeat profile. 83 153 IPR018502 GO:0005509|GO:0005544
Mtr1g4297 315 SUPERFAMILY Annexin 2 314 IPR037104 GO:0005509|GO:0005544
Mtr1g4297 315 PANTHER ANNEXIN 7 314 - -
Mtr1g4297 315 Gene3D Annexin 242 313 IPR037104 GO:0005509|GO:0005544
Mtr1g4297 315 ProSiteProfiles Annexin repeat profile. 165 237 IPR018502 GO:0005509|GO:0005544
Mtr1g4297 315 ProSiteProfiles Annexin repeat profile. 11 82 IPR018502 GO:0005509|GO:0005544
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g4297 Mtr-Chr1 54643715 54648068 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g4297 1 54643715 54648068 Mtr1g4297 1 54643715 54648068 ECH