Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g1072 ATGAGGCTATGGAAAAGGGCATCGGGAGTTCTAAAGGATAGATACAGAATTTGGGTTGCAAAGGTTTCACCATATGGACCATGTAGAAATCCTGATCTTGAAACTCTTATTATTAAAGCAACAAGCCATGATGAACAATGTATGGATTATAAGAATGTTCAAAGAGTTTTTCAATGGCTAAGAACATCACCTTTATACCTTAAACCACTTTTATGTGGACTTTCAATGAGAATTCAAAGGACACGTAGTTGGGTTGTAGCACTTAAAGGTTTGATGTTAACTCATGGAGTTTATAGTTTTGATTTACCAATGGTTCAAAGCATGGGAAGGTTACCATTTGATTTATCACATTTTAGCGACGGACATTTAAGTCCCGAGAAAGGTTGGGTTTTTAACGCTTTTGTTCGATCTTACTTTGCTTATTTGGATCAAAGATCGGTAATTTTGAGGGAGGAGGCAAATAAATTACAAAACAAAAAAGGAAAGGAAAGTGAAGAAATTCCATTGATTGAAGAGTTGAAGAATTTGGAGGAGTTACAAAAATTGATTGATATGTTGTTACAAATAAAACCTAAGAGTGAAATGAGTATGAAAATTGTTCTTATTCTAGAAGCAATGGATTGTGTGATGGATGAGATTTTGGAAGTTTATGGTAAATTTTCCAAAGAGATTAACCGTGTATTGTTAAGGGTTTGTGATATTGGTGGAAAAGAAGAAGCATGCATTGGTCTTGATATTATAAGAAAAGCTCAATTGCAAGGTGATAAATTATCTTTATACTTTGATTTTTGTAGAGAAATTGGTGTTCTTAATAAATCAGAATGTCCAAATATTTTAAGAATTAATGAAGAGGAAATTGAAGAACTCAAGAGAATCAAGAATAAAGATGAAGAGAAAGCTATTGTTGTTAGAAATGATTATGAACAATTGAAGAATGGTTTGAAGACTACAGTGATTACGGATCAATGGGAGGTATTTGTTGATGATGTTATTGTTGATGTTCAACAACATGTTCCTAATGTTACTACATTATGCGTTATTCACACTAATAACCCTTTTGTTGATGAATGTTATAGCAGTGTACCATATGATCCTGTTCAAAATTATGAACTTCCGGATCTAATTAGTTTATAG 1134 0.3254 MRLWKRASGVLKDRYRIWVAKVSPYGPCRNPDLETLIIKATSHDEQCMDYKNVQRVFQWLRTSPLYLKPLLCGLSMRIQRTRSWVVALKGLMLTHGVYSFDLPMVQSMGRLPFDLSHFSDGHLSPEKGWVFNAFVRSYFAYLDQRSVILREEANKLQNKKGKESEEIPLIEELKNLEELQKLIDMLLQIKPKSEMSMKIVLILEAMDCVMDEILEVYGKFSKEINRVLLRVCDIGGKEEACIGLDIIRKAQLQGDKLSLYFDFCREIGVLNKSECPNILRINEEEIEELKRIKNKDEEKAIVVRNDYEQLKNGLKTTVITDQWEVFVDDVIVDVQQHVPNVTTLCVIHTNNPFVDECYSSVPYDPVQNYELPDLISL* 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g1072 377 Gene3D - 5 153 IPR008942 -
Mtr1g1072 377 SUPERFAMILY ENTH/VHS domain 32 150 IPR008942 -
Mtr1g1072 377 CDD ANTH_N_AP180_plant 33 148 - -
Mtr1g1072 377 Gene3D ANTH domain 155 308 IPR014712 GO:0005545|GO:0030136|GO:0030276|GO:0048268
Mtr1g1072 377 Pfam ANTH domain 32 289 IPR011417 GO:0005543
Mtr1g1072 377 ProSiteProfiles ENTH domain profile. 25 156 IPR013809 -
Mtr1g1072 377 SUPERFAMILY GAT-like domain 170 291 - -
Mtr1g1072 377 Coils Coil 279 299 - -
Mtr1g1072 377 PANTHER OS08G0467300 PROTEIN 1 375 - -
Mtr1g1072 377 PANTHER CLATHRIN ASSEMBLY PROTEIN 1 375 IPR045192 GO:0048268|GO:0072583
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g1072 Mtr-Chr1 12220605 12221738 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g1072 1 12220605 12221738 Mtr1g1072 1 12220605 12221738 ECH