Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g1056 ATGGCAATGCCAATGGGAAATGCAGTAATGCCGGAGATAAAGTATTTTCCGGTAGTGTTTACTGGCGGTGAAGTGCAGCAACAATGGTTTGTGGATGAGAGAGATGGGTTTATGAATTGGCTTCGCAGCGAATTTGCAGCTGCGAATGCGATTATAGATTGTTTGTGTCAGCATTTAGGTGTTGCTGGTGAGAGTGGTGAGTATGATCATGTTGTTGGTGCAATTCAGCAGAGGAGAATTAATTGGAATCAAGTGCTTCTTATGCAGCAGTACTATTCGGTTAATGAGGTGGAGTATGCGTTACAGCAGGTGGCGTGGCGGAAGCAGCAGAGGTTTGTGAAGCCGGTTGTTAAGGAGTTTAGGAAGGTTAAGCAATGGCAGAGGTTTGAGGCTTCCAATGTTAAGGAAGGTAGTAATTCTAGTGTTGAAATGCATAGTAACAAAGCGAATTCAACGGTTAAAGAGACTCGAGTTGTTGACAAGATCGAAGAAATTAAATGTGAGGGCATGGTTGGAACCAAGGATGATAAGATTTCAGACATTGCCGAGGACAAGAAAGATAGTATAACAAATCATCAAACCGATGGTATTTTGAAGAAATCTGGCAATCCTCATGGATCTCTTTCCAGTTCAGAATGTGAAGCTGTGTGTTTAAATGAAGGAATTGCATCAAGCCCTCGAGAAAATGAATCAAATTCTATGCAAAATGAAAATCAAACGAAGAATGATTCTAAAATGGGAAAAACTTTTATAAGCAACGAGATATTTGATGGAAAGAAGGAGAATGTGGTTGATGGACTAAAGTTGTATGAACATTTACTTGATAGTACTGAAGTTTCAGAACTAGTTTCATTGGTCAATGATCTGAGGGTTTCTGGAAGAAGAGGACAATTTCAAGGAAGTCAAACATATGTAGCCTCTAGAAGGCCCGTGGGAGGGCATGGAAGGGAGATGATTCAGTTGGGTGTTCCAATTGCTGATGCTCCACCAGATATGGACAATTTGACAACATCGACCAAAGAAAAGAATATAGAATCTATACCATCCTTGCTTCAAGATATTATTGAGCGCATGACAGCCTCGCAAGTGATGACTGTGAAGCCTGATGCTAGCATTGTAGATTTCTATAACGAGGGTGATTACTCAATGCCAAACAGTTGGCCGTCTTGGTTTGGAAGGCCTGTTTATACGTTATTTCTGACTGAATGTGACATAACTTTTGGGAGAACAATTGTCTCACGCCACCACCCTGGGGATTATAGGGGCTCTCTCAAGCTTTCTCTCATACCTGGGTCCATTATAGTGATGCAAGGAAATGCAGCTGATTGTGCTAAACATGCTATTCCTTCTATTCATAAACAACGCATACTTATTACTTTCGCAAAGTCTCAGCCAAAACAGTCCCTGCCAATTGATGCTCAACGCCTTGGTTCGCCCGCGACATCATATTCGTTAGCTGCACCGATCAGAACTACAAATCATATCAGTCACCATCAGCATCAGTTAGCCCCCAAGCATTATTCTGCTGTTGAAATAACCGGGGTTCCGCCTGCTCCCTCCCTCCGCACACCTCCAAACAGCACGCAGCCATTGTTTGTGCCAGTGCCAGTCGCATTTCCCATGCAATGTTCTACACCTGTGCCGATTCAGCCTGGTTCTACAGGATGGTCCGTCTCTCCTCCAAGGCACCCTCCTCCCCGTATCCTCGTTTCCGGCACGGGAGTCTTCCTCCCTCCACCTGGTTCAGCTAATTCATCTCAGCACTTGCAAGGTACCGTAACTCCAACCACGATAAAACAAAATGGGAAATCAAATCACAACAATACTAATGGTTCGTCAAAAGGTAAAATGGATGGTAATATGCAAATGCAAGAATGCAGTGGAAATGCAGATGGAACTAAAGTTGAAAAAGTTATAGAGGAAGAAGGGAAAAATAATGGAGAAATTGTTTCAAGCCACTGA 1962 0.4297 MAMPMGNAVMPEIKYFPVVFTGGEVQQQWFVDERDGFMNWLRSEFAAANAIIDCLCQHLGVAGESGEYDHVVGAIQQRRINWNQVLLMQQYYSVNEVEYALQQVAWRKQQRFVKPVVKEFRKVKQWQRFEASNVKEGSNSSVEMHSNKANSTVKETRVVDKIEEIKCEGMVGTKDDKISDIAEDKKDSITNHQTDGILKKSGNPHGSLSSSECEAVCLNEGIASSPRENESNSMQNENQTKNDSKMGKTFISNEIFDGKKENVVDGLKLYEHLLDSTEVSELVSLVNDLRVSGRRGQFQGSQTYVASRRPVGGHGREMIQLGVPIADAPPDMDNLTTSTKEKNIESIPSLLQDIIERMTASQVMTVKPDASIVDFYNEGDYSMPNSWPSWFGRPVYTLFLTECDITFGRTIVSRHHPGDYRGSLKLSLIPGSIIVMQGNAADCAKHAIPSIHKQRILITFAKSQPKQSLPIDAQRLGSPATSYSLAAPIRTTNHISHHQHQLAPKHYSAVEITGVPPAPSLRTPPNSTQPLFVPVPVAFPMQCSTPVPIQPGSTGWSVSPPRHPPPRILVSGTGVFLPPPGSANSSQHLQGTVTPTTIKQNGKSNHNNTNGSSKGKMDGNMQMQECSGNADGTKVEKVIEEEGKNNGEIVSSH* 654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g1056 653 MobiDBLite consensus disorder prediction 595 619 - -
Mtr1g1056 653 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN-RELATED 1 641 IPR044842 GO:0003729|GO:0006402|GO:0032451
Mtr1g1056 653 SUPERFAMILY Clavaminate synthase-like 261 460 - -
Mtr1g1056 653 MobiDBLite consensus disorder prediction 224 245 - -
Mtr1g1056 653 Gene3D - 251 469 IPR037151 -
Mtr1g1056 653 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN 1 641 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g1056 Mtr-Chr1 12076210 12080881 Proximal
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g1056 1 12076210 12080881 Mtr1g1056 1 12076210 12080881 ECH