Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g1053 ATGGCTGCCACATTCATTTCTCGAATCTCCCTTCTTCAACCAAACCCATCTCTCTCTCTTTCACCTCATCAATCTCCTCAACTTTCCTCAAATTTAAGGTTTGAGGCCAAAAGGGCAAAAGGGGTTGTGCTAAAAGCTTCTTCTGGTGCATTGAATGTGAATTCAAAGCAAGGTGTTTCAGTTGAAAAATCCAAATCCAATGATCCAATTGTTGTTATTGATAACTATGATAGCTTTACCTATAATCTCTGTCAGTATATCGGGGAGTTAGGAGTTCACTTTGAGGTCTACCGAAATGACGAGCTAACGGTGGAGGAGTTGAAAAGAAAAAATCCGAGAGGAGTGCTGATATCACCTGGGCCAGGAACACCTCAAGATTCAGGCATATCTTTGCAAACAGTTTTCGAACTTGGACCAACTATACCTGTGTTTGGTGTATGCATGGGATTGCAGTGCATGGGAGAGGCTTTCGGCGGGAAAATTATTCGTGCTCCTTCTGGTGTGATGCATGGGAAAAGTTCTCTGGTTTATTATGACGAGAAAGGAGAAGATGGATTACTTGCTGGACTACCAAATCCTTTCTTGGCTGGACGATATCACAGCCTTGTGATTGAAAAGGAGAGCTTTCCTGATGATGAACTTGAGGTAACGGCATGGACTGAAGATGGTCTCATAATGGCTGCTCGTCACAAGAAATATCGGCATATGCAGGGTGTTCAGTTTCATCCAGAGAGCATTATAACCCCTGACGGAAAGACGATTGTCCACAACTTTGTGAAGCTTATAGAGAAAAAGGAAGCTGCTCGTTCTTGA 813 0.4305 MAATFISRISLLQPNPSLSLSPHQSPQLSSNLRFEAKRAKGVVLKASSGALNVNSKQGVSVEKSKSNDPIVVIDNYDSFTYNLCQYIGELGVHFEVYRNDELTVEELKRKNPRGVLISPGPGTPQDSGISLQTVFELGPTIPVFGVCMGLQCMGEAFGGKIIRAPSGVMHGKSSLVYYDEKGEDGLLAGLPNPFLAGRYHSLVIEKESFPDDELEVTAWTEDGLIMAARHKKYRHMQGVQFHPESIITPDGKTIVHNFVKLIEKKEAARS* 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g1053 270 PRINTS Anthranilate synthase component II signature 70 84 - -
Mtr1g1053 270 PRINTS Anthranilate synthase component II signature 115 124 - -
Mtr1g1053 270 PRINTS Anthranilate synthase component II signature 142 153 - -
Mtr1g1053 270 PRINTS Anthranilate synthase component II signature 168 176 - -
Mtr1g1053 270 PRINTS Anthranilate synthase component II signature 191 203 - -
Mtr1g1053 270 PRINTS Anthranilate synthase component II signature 238 251 - -
Mtr1g1053 270 PANTHER ANTHRANILATE SYNTHASE BETA SUBUNIT 1, CHLOROPLASTIC 31 269 - -
Mtr1g1053 270 ProSiteProfiles Glutamine amidotransferase type 1 domain profile. 69 268 - -
Mtr1g1053 270 SUPERFAMILY Class I glutamine amidotransferase-like 70 263 IPR029062 -
Mtr1g1053 270 PRINTS Carbamoyl-phosphate synthase protein GATase domain signature 112 126 - -
Mtr1g1053 270 PRINTS Carbamoyl-phosphate synthase protein GATase domain signature 142 158 - -
Mtr1g1053 270 PANTHER MULTIFUNCTIONAL TRYPTOPHAN BIOSYNTHESIS PROTEIN-RELATED 31 269 - -
Mtr1g1053 270 CDD GATase1_Anthranilate_Synthase 70 259 IPR006221 -
Mtr1g1053 270 Gene3D - 68 261 IPR029062 -
Mtr1g1053 270 TIGRFAM trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 70 260 IPR006221 -
Mtr1g1053 270 Pfam Glutamine amidotransferase class-I 71 259 IPR017926 -
Mtr1g1053 270 PRINTS Glutamine amidotransferase superfamily signature 115 124 - -
Mtr1g1053 270 PRINTS Glutamine amidotransferase superfamily signature 142 153 - -
Mtr1g1053 270 PRINTS Glutamine amidotransferase superfamily signature 238 251 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g1053 Mtr-Chr1 12046940 12051226 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g1053 1 12046940 12051226 Mtr1g1053 1 12046940 12051226 ECH