Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mtr1g1051 | ATGGAAAAGATTCAAATGATGTTGTTCTTGTTCTGTTTTTTTATTTTTGTTATGCCTTGTTACTCTGTTTCACCTAGAAATTTTCCTATTATACCTTTTGATGAAGGGTATACACCTTTGTTTGGAGACCATAACTTGATCATTCATTCTGATTCCAAAGCTGTTCATCTCTTACTTGATGAGTCTTCAGGCTCTGGATTTGCTTCTCATGATCTTTACCTTCATGGTTATTTCAGTGCTTCCATTAAATTACCTTCTGATTACACTGCTGGAGTTGTGGTTGCATTTTATTTGTCAAATGGTGACATGTATGAGAAGAACCATGATGAAATAGACTTTGAATTTTTGGGAAACATAAGAGGCAAAGATTGGAGGATTCAAACAAATGTTTATGGAAATGGAAGTACAAACATTGGAAGAGAAGAAAGATATGGTTTATGGTTTGATCCTTCAGAGGAATTTCATCACTATAGTATTCTTTGGACAGATTCTAAGATAATATTTTATGTAGATGATGTTCCTATCAGAGAAGTAAAGAGAACTGAGTCAATGAGAGGAGATTTTCCATCAAAGGCTATGACTTTGTATTCTACCATATGGGATGCATCTACTTGGGCTACCAATGGAGGAAAATACAAAGTAAACTACAAATATGCACCCTATATTGCTGAATTCTCCGACTTTGTCCTACATGGTTGTGCAGTTGATCCTATTGAGCATGTGACCAAGTGTGACAGTGCTCAAAGTTCAGAAACTGTACCTTCTGATGTTACACAACTAGAAAGAATCAAAATGGAGAACTTTAGGTTGAAACACATGACATATTCTTACTGTTATGACAAAACTAGATATAAAGTCCCTCTACCGGAGTGTGTGATCGATTCGCGACAAGCTGAAAGGCTGAGAAAATTTGATCCTGTTACATTTGGTAATGGCCGGCACCGCCGTGGAAAGAGACATCACCAAAACAAAGTTACTTCGTTTTAG | 987 | 0.3637 | MEKIQMMLFLFCFFIFVMPCYSVSPRNFPIIPFDEGYTPLFGDHNLIIHSDSKAVHLLLDESSGSGFASHDLYLHGYFSASIKLPSDYTAGVVVAFYLSNGDMYEKNHDEIDFEFLGNIRGKDWRIQTNVYGNGSTNIGREERYGLWFDPSEEFHHYSILWTDSKIIFYVDDVPIREVKRTESMRGDFPSKAMTLYSTIWDASTWATNGGKYKVNYKYAPYIAEFSDFVLHGCAVDPIEHVTKCDSAQSSETVPSDVTQLERIKMENFRLKHMTYSYCYDKTRYKVPLPECVIDSRQAERLRKFDPVTFGNGRHRRGKRHHQNKVTSF* | 329 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mtr1g1051 | 328 | SUPERFAMILY | Concanavalin A-like lectins/glucanases | 32 | 294 | IPR013320 | - | |
| Mtr1g1051 | 328 | CDD | GH16_XET | 31 | 291 | IPR016455 | GO:0010411|GO:0016762|GO:0042546 | |
| Mtr1g1051 | 328 | PANTHER | XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 27-RELATED | 9 | 311 | - | - | |
| Mtr1g1051 | 328 | Pfam | Xyloglucan endo-transglycosylase (XET) C-terminus | 255 | 291 | IPR010713 | GO:0005618|GO:0006073|GO:0016762|GO:0048046 | |
| Mtr1g1051 | 328 | ProSiteProfiles | Glycosyl hydrolases family 16 (GH16) domain profile. | 24 | 225 | IPR000757 | GO:0004553|GO:0005975 | |
| Mtr1g1051 | 328 | PIRSF | EndGlu_transf | 1 | 296 | IPR016455 | GO:0010411|GO:0016762|GO:0042546 | |
| Mtr1g1051 | 328 | MobiDBLite | consensus disorder prediction | 313 | 328 | - | - | |
| Mtr1g1051 | 328 | MobiDBLite | consensus disorder prediction | 309 | 328 | - | - | |
| Mtr1g1051 | 328 | Pfam | Glycosyl hydrolases family 16 | 35 | 217 | IPR000757 | GO:0004553|GO:0005975 | |
| Mtr1g1051 | 328 | Gene3D | - | 21 | 291 | - | - | |
| Mtr1g1051 | 328 | PANTHER | XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 8-RELATED | 9 | 311 | IPR044791 | GO:0004553 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Mtr1g1051 | Mtr-Chr1 | 12010505 | 12014089 | Transposed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Mtr1g1051 | 9 | 326 | Glycoside Hydrolase | AT1G14720 | 64.798 | 1.69e-159 | 447 |
Event-related genes