Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g1050 ATGAGTGCCTGTGTAATGTCAGGTTTGGCTCACTTGTTTGGAATCTTGTCCTTCATACTCATACTTGTTTGGTTGTTACATTTTCGCGAAGGGATTGACTATGCTTCCGTGAATCCATTTCGCGTCTTCAATGTACACCCTTTAATGATGTTCCTCAGCCTTATTTTCCTTGCTGGTGAAGCTATTATGGCATTCCAAACGGTACCTGCACAAAGACATATCAAGAAGTTTTTTCATATGGCACTACACTTGATTGCTATTGTTTTGGGCATAGTTGGTTTGTGTGCAGTTTTCAAGTTCCATGATATGCTACATATTCCGCATCTTTACAGTCTTCATGGATGGATTGGTATTCTCACCTTGTGCTCGTATGGTTTGCAGTGGGTTTTTGGCTTGGTTACATTCTTGGTTCCTGGAGCACAAGATGCAACAAGAGCTAGAGTACTTCCATGGCACAAAATTGGTGGTAAAGTACTATTTCTTATGGCAATATGTGCTGCAGAAACAGGATTGATGGAGAAGGCTGGTTTCTTGAGTCTGAAGGCACATCAGACTGAAACTAGTTTGGTCACCTTCACTGGTCTTTCAATTCTATTGTTTGGTGCCTTTGTCTTCGTGTCTATTGGTATTCGTTAA 636 0.4104 MSACVMSGLAHLFGILSFILILVWLLHFREGIDYASVNPFRVFNVHPLMMFLSLIFLAGEAIMAFQTVPAQRHIKKFFHMALHLIAIVLGIVGLCAVFKFHDMLHIPHLYSLHGWIGILTLCSYGLQWVFGLVTFLVPGAQDATRARVLPWHKIGGKVLFLMAICAAETGLMEKAGFLSLKAHQTETSLVTFTGLSILLFGAFVFVSIGIR* 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g1050 211 Pfam Eukaryotic cytochrome b561 45 177 IPR006593 -
Mtr1g1050 211 CDD Cyt_b561_ACYB-1_like 36 178 - -
Mtr1g1050 211 Gene3D - 1 209 - -
Mtr1g1050 211 ProSiteProfiles Cytochrome b561 domain profile. 9 209 IPR006593 -
Mtr1g1050 211 SMART 561_7 45 171 IPR006593 -
Mtr1g1050 211 PANTHER TRANSMEMBRANE ASCORBATE FERRIREDUCTASE 3-RELATED 2 210 - -
Mtr1g1050 211 PANTHER CYTOCHROME B561-RELATED 2 210 IPR043205 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g1050 Mtr-Chr1 11988383 11991906 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g1050 9 210 Chloroplast and Mitochondria Gene Families AT1G14730 48.515 2.12e-70 212
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g1050 1 11988383 11991906 Mtr1g1050 1 11988383 11991906 ECH