Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g1035 ATGCATCTCTCTATTTTCTTCCTCCTTTTGTTTTTCCTCACAAATCTTCAACCTTCATTTTCCCAACAACAACATCAAAAACTAACATCATTCAACATCTCAAACTCACCATGGCTTCCTTCACAAAACATAACACTAACCTCACCAAACACAAATTTCTCAGCTGGTTTTTTTCCTATACCAAATTCACAAAACCTCTTCACTTTCTCTATTTGGTTCACAAAAATACCTCAATCTTCAAATCCTCTTATTTGGAGCATACCAACAAATCTAAGTTCATCTTCCTCTCTTGTTATCACTTCAAAAGGTGAACTTTTACTCAACAATGTTTCCTTTGTTAATCATTCCAATTCCTCACAACTTGTTCTTCATGATAGTGGAAACTTAGTTTTTGGAAATTGGACTAGTTTTTTGAATCCTACTAATACTATTGTACCAAGCCAAAATATTAGTGGAATTGAAATTGTTTCAAGTAATGACAAGTATAAGTTGATTAATTCTAGTTTTTTGATTCTCAATGATAATTCATCTTCTCAATACTATAACACACAAAGCCCTTTGGTGAGTATGGATGATCTTGGAAAAATGAGTTATCAAAGTAACTCTTTTCTTACTTCTGATTATGGTGATTCTAGGATTAGAAAACTTGTTCTTGATGATGATGGAAATTTGAGAATTTATAGTTTTTATCCTGAACAAAAGAATACATGGGTTGTTGTTTGGTTAGCGATTTGGGAATCGTGTAAAATCAAAGGAAAATGCGGTCCTAATTCGATATGTATGCCTAGAGAAGATTTTTATAATTCAACTTATTGTGTTTGTCCTTCTGGATTTGAGCCTGTTGAAGGTGGAAGTGAAAAGGGTTGTAAGAGGAAAATTCAACTTTCTAGTAATATTCATTTTCTTAGGCTTGATTATGTAAACTATACGAGTAATGGTTCAATGAACCAAATTACTGCTAATAACTACTCAATTTGTGAATCAAACTGTACAAGAAATGTGGACTGTCTTGGATTTGGATTCAAATACGATGGATCGGGACTTTGTGTTTTGCTACGAGGTAAACAGCTTCAGTATGGTTATTGGTCACCGGGGACTGAACTTGCTTTGTTTTTGAAAGTGGATCAGAAGGAAACAGAAGCTCCTAATTTCATTGGTATGACAGAAGTTATGCAAACAACTTGTCCTGTGAGGATAAGTTTGCCTTTGCCGCCGAAGGATTCGAACACTACCACGAGAAATATTGTTATTATCTGCACGCTTTTTGCGGCTGAACTCATTGCTGGTGTGGCTTTCTTTTGGTCTTTCCTTAAGAGGTATATCAAGTATAGGGACATGGCTACCACATTAGGTCTTGAGCTTTTACCTGCAGGTGGTCCGAAAAGGTTTACCTACTCGGAGATCAAAGCTGCTACTAATGATTTCTCGAATCTCATTGGGAAGGGTGGATTTGGAGATGTTTATAAAGGCGAGTTGCCAGATCACCGTGTTGTTGCGGTGAAGTGCTTAAAGAATGTTACTGGAGGTGACGCTGAGTTCTGGGCGGAAGTTACAATCATTGCGAGGATGCATCATCTTAACTTGGTTCGATTGTGGGGTTTCTGCGCCGAGAAAGGTCAAAGAATACTTGTTTATGAATACATCCCGGGTGGATCATTGGACAAGTACCTCTTCAGGGTCAAGTCTAAAAAGAGTAGTGGTACTGGTGAGTCAGAATCTGATCTAAGTCATGATACTAGCCTACCAGATCCAAGTATCTCAGATAAACCTGTTTTGGATTGGAACATGAGGTATAGAATTGCACTTGGTATGGCAAGGGCTATTGCGTATCTACATGAGGAGTGTTTGGAATGGGTTTTGCATTGTGATATTAAGCCAGAAAACATTCTCTTAGGCGATGATTGTTGTCCTAAGATATCGGATTTTGGATTGGCGAAACTAAGGAAAAAAGAAGACATGGTGACTATGTCAAGAAGGAGAGGAACTCCTGGTTATATGGCACCTGAATGGATAACAGCAGATCCAATAACTTCTAAAGCTGATGTTTATAGTTTTGGTATGGTGTTGTTGGAGCTTGTGAGTGGAGTGAGGAACTTCGAGATTCAAGGCTCTGTGGCGAGGAGTGATGAATGGTATTTTCCTGGATGGGCTTTTGATAAGATGTTTAAGGAAATGAGAGTTGAAGAAATTCTTGATAGTCAAATTTGTCATGCTTATGATAGTAAAGCACATTTTCAATTGGTTAACAGAATGGTGAAGACTGCGATGTGGTGCTTGCAAGATAGGCCTGAGGCAAGGCCAACAATGGGGAAAGTTGCTAAGATGATAGAAGGGACTGTGGAGATCATGGATCCTAAGAAACCAACAGTTTTCTTCCTTGGGGAAGAGTAG 2391 0.3806 MHLSIFFLLLFFLTNLQPSFSQQQHQKLTSFNISNSPWLPSQNITLTSPNTNFSAGFFPIPNSQNLFTFSIWFTKIPQSSNPLIWSIPTNLSSSSSLVITSKGELLLNNVSFVNHSNSSQLVLHDSGNLVFGNWTSFLNPTNTIVPSQNISGIEIVSSNDKYKLINSSFLILNDNSSSQYYNTQSPLVSMDDLGKMSYQSNSFLTSDYGDSRIRKLVLDDDGNLRIYSFYPEQKNTWVVVWLAIWESCKIKGKCGPNSICMPREDFYNSTYCVCPSGFEPVEGGSEKGCKRKIQLSSNIHFLRLDYVNYTSNGSMNQITANNYSICESNCTRNVDCLGFGFKYDGSGLCVLLRGKQLQYGYWSPGTELALFLKVDQKETEAPNFIGMTEVMQTTCPVRISLPLPPKDSNTTTRNIVIICTLFAAELIAGVAFFWSFLKRYIKYRDMATTLGLELLPAGGPKRFTYSEIKAATNDFSNLIGKGGFGDVYKGELPDHRVVAVKCLKNVTGGDAEFWAEVTIIARMHHLNLVRLWGFCAEKGQRILVYEYIPGGSLDKYLFRVKSKKSSGTGESESDLSHDTSLPDPSISDKPVLDWNMRYRIALGMARAIAYLHEECLEWVLHCDIKPENILLGDDCCPKISDFGLAKLRKKEDMVTMSRRRGTPGYMAPEWITADPITSKADVYSFGMVLLELVSGVRNFEIQGSVARSDEWYFPGWAFDKMFKEMRVEEILDSQICHAYDSKAHFQLVNRMVKTAMWCLQDRPEARPTMGKVAKMIEGTVEIMDPKKPTVFFLGEE* 797
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g1035 796 Pfam S-locus glycoprotein domain 200 281 IPR000858 GO:0048544
Mtr1g1035 796 SUPERFAMILY alpha-D-mannose-specific plant lectins 65 228 IPR036426 -
Mtr1g1035 796 PANTHER OS10G0101000 PROTEIN 4 796 - -
Mtr1g1035 796 ProSitePatterns Protein kinases ATP-binding region signature. 479 501 IPR017441 GO:0005524
Mtr1g1035 796 ProSitePatterns Serine/Threonine protein kinases active-site signature. 619 631 IPR008271 GO:0004672|GO:0006468
Mtr1g1035 796 PANTHER OS07G0415500 PROTEIN 4 796 - -
Mtr1g1035 796 PIRSF SRK 1 796 IPR024171 GO:0004674
Mtr1g1035 796 SMART serkin_6 473 776 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g1035 796 CDD STKc_IRAK 479 778 - -
Mtr1g1035 796 Gene3D Transferase(Phosphotransferase) domain 1 575 787 - -
Mtr1g1035 796 ProSiteProfiles Protein kinase domain profile. 473 780 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g1035 796 Pfam Protein kinase domain 477 773 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g1035 796 Gene3D Phosphorylase Kinase; domain 1 447 547 - -
Mtr1g1035 796 ProSiteProfiles PAN/Apple domain profile. 289 375 IPR003609 -
Mtr1g1035 796 SUPERFAMILY Protein kinase-like (PK-like) 456 776 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g1035 Mtr-Chr1 11766852 11769714 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g1035 461 788 Receptor kinase-like Gene Family AT4G18250 39.104 1.32e-75 257
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Mtr1g1035 Pkinase 3.6e-45 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g1035 1 11766852 11769714 Mtr1g1035 1 11766852 11769714 ECH