Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g1032 ATGTCGGCATCAGTGGACCATACTGATCAAAGAGCTGAAGCCATTCCCTGCTCCACAGCTACACCAAATTGGACCGTTCATGTTTCAGATATAAGAACAGTTAAAGTGAGTAACATATCACTGATTACTTCCAAGCAAGACATTGAAGAATTCTTTTCATTCTCGGGTGATATTCAATATATTGAGATGCAAAGGGAATCTGATCGCACTCAAGTTGCTTATGTTACCTTTAAGGATTCACAGGGAGCAGAGACAGCAGTTCTCTTGACGGGTTCTAAGATAGGTGACTTATATGTTACCATCTCACCTGTGGAGCAGTACCAACTTCCCCCTGAAGCGCTTCCCTCAAGTCCTACAAACCAAAGTGCCGATGCAGTTAAGAAGACCGAAGATGTAATAAGTACCATGCTTGCCAAGGGTTTCATTTTAGGAAAGGATGCAATCAACAAGACAAAATCCATTGATGAACGTCTTCAATTGACCTCTAATGCTTCTTCCGCAGTTGCTTCTATTGATAATAAAATTGGTTTAAGTGATAAACTTAGTATTGGAACAACCATTGTCAATGAAAAAGTCAAAGAGATGGATGAAAGGTATCAGCTTTCTGAAATGACAAAGTCTGCTATTGCTGTTGCTGAGCAAAAGGCAAGTAGTGCTGGATCCGCTATCATGAGCAATTCTTATGTCTTAACTGGAGCTTTATGGCTGTCGAGTGCGTTTAGCGTTGTTGCCAAGGCAGCTGAGGATGTCAGCACGATGACCATGGAGAAGGTTGAACAAGCTGAGGTGGAAAATAAGGAGATCATTTACAGTGAAAGAAAAGGGACGGTTGATGAATATGCTCAGATGAACTTTGAGGACTCTTTAAACGGCGGCCCTGCAGTAGTTCCTGTTAGTTCTGAAAATGACGGTAAAGCTAGTAATTTTCTAACTTGA 936 0.4135 MSASVDHTDQRAEAIPCSTATPNWTVHVSDIRTVKVSNISLITSKQDIEEFFSFSGDIQYIEMQRESDRTQVAYVTFKDSQGAETAVLLTGSKIGDLYVTISPVEQYQLPPEALPSSPTNQSADAVKKTEDVISTMLAKGFILGKDAINKTKSIDERLQLTSNASSAVASIDNKIGLSDKLSIGTTIVNEKVKEMDERYQLSEMTKSAIAVAEQKASSAGSAIMSNSYVLTGALWLSSAFSVVAKAAEDVSTMTMEKVEQAEVENKEIIYSERKGTVDEYAQMNFEDSLNGGPAVVPVSSENDGKASNFLT* 312
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g1032 311 Gene3D - 28 102 IPR012677 -
Mtr1g1032 311 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 32 106 IPR000504 GO:0003723
Mtr1g1032 311 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 35 96 IPR000504 GO:0003723
Mtr1g1032 311 SUPERFAMILY RNA-binding domain, RBD 25 105 IPR035979 GO:0003676
Mtr1g1032 311 SMART rrm1_1 33 102 IPR000504 GO:0003723
Mtr1g1032 311 PANTHER RNA-BINDING (RRM/RBD/RNP MOTIFS) FAMILY PROTEIN 9 306 - -
Mtr1g1032 311 PANTHER SERINE/ARGININE-RICH SPLICING FACTOR 9 306 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Mtr1g1032 Mtr-Chr1 11739475 11743651 Dispersed/Wgd
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g1032 1 11739475 11743651 Mtr1g1032 1 11739475 11743651 ECH