Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g1031 ATGATAATAATCAAATCTAGAAATTCCAAACGCAAGCTTCAACACGAACCTTCACCGTTACACGTCATCAGCAAGAAGCTCCGGTCGAAGATTCCTCGCCGGAAACGACGTCAGATCTCACCGGTGCTACTTGTTTCTCCGAGATTCAAAGCTTCTCGTGAGAATCGCGGTTTTTCTGTTGGTTCAGTTGATTCGAGTTCTGGTTCGGATTTCGCCGGAGGTGAAGTTTCGTGTGATTCGAGTAGAATCTCTGCTGTTAAAGGAAGAACGAACTCGAGAAGTGAAATTTCGAGTGGTGTTGAATGTGTTCGTAGATTTGAGAAGAGGAATGAGAATGAAGTTGAAGTTTCGGAGACTTCGTGTGTGGATTCTAGTTCTGGAGTTCGTAGAAACTTGATTTTGAAGTTTGAAAATGGAAAAGAGAACGATGAAGTTTCTGAAGTTTGTACGAAATCGGAACTTACTTTTGCTGAGAATTCAAAATCGAGTAACGGAAATTCGAATTTGAATTTGAATTTGAATATCTCGTCGGAGATAACACGAAACGATGTTGTTTCCGTTAACAGAGCATCGGAATCTGAATTTTCTCAAATTTCGAGAAATCGTAATGCTGATGAGAATTGCGTTATCGCGCAATCGATTATGAAGAATTATTCGGATAATTCAGGTTACGATTCCGATCTAGCTTGTTCTGAGAAACTGCAATTCTCTTACTACGACGATGATGAATCGGAGGAGTATTGTTCAAGTCAGGGAACTACATTCTCTGATCTTCACTCGGATATTTTCAGTGAAGGTTCAGATTATTCTCCGTCGCAGTTCATTGATTCTGGTAGCGAGTTTTCACAAGGATCCGTTGGTGAAACTCCTTCTCATACTTATTCGTTGCTTCTTCGATACCGCGACGAATTCGCAAAGCTAGGTTCTCCGGTTAAAGCTACTTCAATTGTTGTAGAAGATTTTTCTCTTCATAACAATTTTTCGAGGTTTGAAGATATTGATGATGAAGAGAGTTACCAGATGCTGAGAAAGAGAGAACGAAGGCAAGCTTTCATGTGGAATTATGGAGAAAGATATTTCTCTGCAACGGATTTTGCGGAAGTATTTCAGCAACGTTCACGAATGGTTCATTGGATTGTTGAGCACTCTTATCGAAAACAGCTTCGACCAGAGACAATGTTTCTTGCAATCAATCTACTTGACCGTTTCCTGAGCAAGGGATACTTCAAAGCAGAAAGAAACCTTCAAATTGTTGGAATAGCGTGTCTTACATTGGCAACAAGAATCGAAGAAAACCAGCAATATAACAGAGTGAACCAGAAAAATTTCTACATAGAAAAAAGTGTGTACAGTAGATGCGAAGTGGTGGCTATGGAATGGATGGTGCAGGAGGTGCTAGAGTTCGAGTGTTTTCATCCAACCATCTACAATTTCTTGTGTTTCTACCTTAAAGCTGCTAATGCTGATGCTGTTGTGGAGAAAAGGGTCACGTGCCTTGCATTACTGGCTCTGTCAGGTCCTGATCAGCTGTGTTACTGGCCCTCAACTATTGCTGCTGCAATAGTAATCCTGGCCAGTCTAGAGCTCAATCAGAAAGCATCCCACAAAGTCATAGGGATCCACATTAGATCAAAGGAAGAGAATTTGCATGAATGCATGGAGAGCATGGAGTGGTTGTTACGCTATCTATGA 1692 0.4102 MIIIKSRNSKRKLQHEPSPLHVISKKLRSKIPRRKRRQISPVLLVSPRFKASRENRGFSVGSVDSSSGSDFAGGEVSCDSSRISAVKGRTNSRSEISSGVECVRRFEKRNENEVEVSETSCVDSSSGVRRNLILKFENGKENDEVSEVCTKSELTFAENSKSSNGNSNLNLNLNISSEITRNDVVSVNRASESEFSQISRNRNADENCVIAQSIMKNYSDNSGYDSDLACSEKLQFSYYDDDESEEYCSSQGTTFSDLHSDIFSEGSDYSPSQFIDSGSEFSQGSVGETPSHTYSLLLRYRDEFAKLGSPVKATSIVVEDFSLHNNFSRFEDIDDEESYQMLRKRERRQAFMWNYGERYFSATDFAEVFQQRSRMVHWIVEHSYRKQLRPETMFLAINLLDRFLSKGYFKAERNLQIVGIACLTLATRIEENQQYNRVNQKNFYIEKSVYSRCEVVAMEWMVQEVLEFECFHPTIYNFLCFYLKAANADAVVEKRVTCLALLALSGPDQLCYWPSTIAAAIVILASLELNQKASHKVIGIHIRSKEENLHECMESMEWLLRYL* 564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g1031 563 SUPERFAMILY Cyclin-like 332 469 IPR036915 -
Mtr1g1031 563 Pfam Cyclin, C-terminal domain 473 558 IPR004367 -
Mtr1g1031 563 Gene3D - 368 464 - -
Mtr1g1031 563 PANTHER CYCLIN-SDS 5 554 - -
Mtr1g1031 563 SUPERFAMILY Cyclin-like 473 560 IPR036915 -
Mtr1g1031 563 ProSitePatterns Cyclins signature. 372 403 IPR006671 -
Mtr1g1031 563 PANTHER CYCLINS 5 554 IPR039361 -
Mtr1g1031 563 Gene3D - 465 562 - -
Mtr1g1031 563 CDD CYCLIN 372 431 IPR013763 -
Mtr1g1031 563 SMART cyclin_7 377 464 IPR013763 -
Mtr1g1031 563 Pfam Cyclin, N-terminal domain 366 469 IPR006671 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g1031 Mtr-Chr1 11734206 11738667 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g1031 370 534 Core Cell Cycle Gene Families AT3G11520 34.132 1.86e-19 88.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g1031 1 11734206 11738667 Mtr1g1031 1 11734206 11738667 ECH