Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g1029 ATGGAGAGTAAAGAAATTGGAAAGGGAAGTGATGTTGGAAAAGAAAGTGAAAATGAAGAGGTTCTAAAGAAGATTATTGCAAGCCATCCTTTGTTTGAAGTATTGATTGAGTCTCACATCAATTGTTTGAAGGTTGGATCTGAGGATGCAGGAGAGTTAGATATAACAAGTGATGCATGGAAGAAATTGGTCAACACAAAGTCCAAAACAACGACTAGTCCAAACAATTCAGAGCTTGATCACTTCATGGAAGCATTTTGCATGGCACTGAGCAACCTCAAAGAAGTGATTGATGAACCGACAAAAGAAGCAAAAGCTTTCATCGATGCTACATATATTCAACTGCAGGAACTTGGTGAAGGAAATAACCTGCACCTTAATTATGATAATACTAATTAG 399 0.3709 MESKEIGKGSDVGKESENEEVLKKIIASHPLFEVLIESHINCLKVGSEDAGELDITSDAWKKLVNTKSKTTTSPNNSELDHFMEAFCMALSNLKEVIDEPTKEAKAFIDATYIQLQELGEGNNLHLNYDNTN* 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g1029 132 Pfam KNOX2 domain 76 118 IPR005541 GO:0003677|GO:0005634
Mtr1g1029 132 Pfam KNOX1 domain 22 46 IPR005540 GO:0003677|GO:0005634
Mtr1g1029 132 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 7 116 - -
Mtr1g1029 132 PANTHER FUSED COMPOUND LEAF 1 7 116 - -
Mtr1g1029 132 SMART KNOX1_2 20 61 IPR005540 GO:0003677|GO:0005634
Mtr1g1029 132 SMART KNOX2_2 69 120 IPR005541 GO:0003677|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g1029 Mtr-Chr1 11698233 11700366 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g1029 21 121 Homeobox Transcription Factor Family AT1G70510 36.364 8.41e-10 53.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g1029 1 11698233 11700366 Mtr1g1029 1 11698233 11700366 ECH