Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g1025 ATGGTTAAAAGTAAAACAATTGAGTTGTATGGATTCCCTCATTATGTGACTGTGCCTGATGTTAAGAGATTTGTAGAGCAGTATACTGGTGAAGGAAGTGTGGTTGCTATAAAGATAAGAGAAGGCAAAGCCCGTATTCGAACAGCATTTGCAATTATCCAATTCACTACTAAAGATCATGTTACAGATATGATGGCCTTACCTAGCAGAAGTTTGTCACCATTGCAGTACGGGAGCTCCTATTTAAAAGTTCGGGAAATGGAAAGAGATATTGTTCGAAGGCCAAGGGAAATTTTGCACAGTTTGAATGATGTGAAACTGTATTTTTGCTGTCAAATCTCAGAGGAAAGATTATCTGTTTTATGGAGAGAGGTGGATGTTAGAGTTGATTTTGGGATTGGAATGAGAAAGTGGCGATTCACTTTGTGCCATGACAATAAGACATTCAAACTTGAGCTTTCATATGAGAATATTTGGAAGATTGAGCTGCATCAACCACGGAGCAAAACTACAAAGTATCTATTGATTCAGTTAATTGGTGCTCCTCGGGTTTTTGAGCTTTATTCTCCTACTTCAGATGATGCATATAACGTATACGAAGATCTTTCCAAGAACTATTTTAGCGATCCCCCTGATGACCAATGGATCCGTGCAGTAGATTTCACTCCATGCAGTTGTATTGGGCAGTCTTCTGCTTTATGTCTAGAGCTTCCTAGCAACAGAGATTTTCCGAATTTCAGGGAAAACTTTGCTCAGTACGAGGAAAGTGCGGGTCCATACATGTTGGAGAGCGGATCACCTTTTTCTTGCAATCTGGATGTTGTCCCCATGGTTTCTCCTCCTCAAGGAATTCAAATTCCATTTGACATCTTGTTTAAAGTTAATTCATTGGTTCAGCACGGGTGTCTTTCAGGTTCTGAACTCGATAATGCTTTCTATCATCTAGTTGATCCAACTAGAGTGAATGTTGAGCTTATTGAGAATGCTTTAGAAAAGATGTACTATTCAAATGATTTCTGTTATGAACCTGTGAGATGGCTGAAAGATCAGTACAAAATGTACCATAGTTCAAATAATCTGCCTCGGTCACCAACTATATCTTTGGATAACGGTTTGGTATATGTTCGCAGGGCACAGATAACACCTTGCAAAGTATACTTTTGTGGTCCAGAGATTAATGTCTCAAATCGTGTTCTGCGTAAATACAAAAAACATATGGATAACTTTCTACGTGTTTCGTTTGTTGATGAGGAGTTGGATAAACTGTATTCATCAGATTTATCTTCACGTATTTCCGTGGGTGGAAGAACTGATATATACTATAGAATTCTTTCCATCCTTAGAAATGGCATAGTTATTGGTGATAAGAAGTTTGAATTTCTAGCTTTTTCATCAAGTCAATTGCGTGAAAGTTCGCTATGGATGTTTGCTCGTACACCAACTGGAGATACCGCTGGTTCCATAAGGGAATGGATGGGAGATTTTAGCCGGATAAAAAATGTAGCTAAATATGCTGCTAGACTTGGACAATCTTTTGGTTCCTCTACCGAAACTACAACGGTCAGCAGCACCGAAATTGAAATTATTCTTGATGTACATAATAAAACCAAATATGTCTTCTCTGATGGAATTGGCAAAATATCTCTTGAACTTGCCAGGAGAGTGGCTCAAAAATGTGGTTATGATTCTATGCCGTCCGCCTTCCAGATTCGGTATGGTGGGTACAAAGGAGTTGTGGCTGTTGATCCAACCTCATCGGTGAAATTGTCACTGAGGATGAGCATGCTCAAGTATGATTCAGACAACACAGATTTGGATGTTTTGGCATGTAGTAAGTTTCGGCCTTGTTATCTGAATCGACAGTTGATTACTCTCTTATCCACTCTTGATGTCGAGGACAGTGTTTTCGAGAAAAAACAAAAAGAAGCTGTTGATCAACTGAACACAATACTAACTGATTCGACAAAGGCACACGAGGTTTTGGACTTGATGTCTTCCGGGGAGGTCACTAATATTCTGAAGGAGATGCTTATTTGTGGTTACAAGCCTAATGTTGAACCATTTCTTTCAATGATGCTGCAGACATTTAGGGCCTCGAAACTTTTGGAATTGCGGCAAAAAACTAGGATATTTATTCCAAAAGGAAGAGCAATGATGGGAGTTCTAGATGAAACTAGAACCCTAGAATATGGTGAAGTTTTTGTTCAATATTCTAACAATAGGGAAGACAGTCTTTCTCATGTAGTTAACGGCAAGGTTGTTGTAGCAAAAAACCCGTGCTTGTACCCAGGTGATGTTCGTGTTTTGAAGGCTGTGGATGTGCCAGCTTTGCGCCACATGGTGGACTGTGTTGTTTTTCCTCAAAAAGGTCACAGGCCACATCCAAATGAATGTTCCGGAAGTGATCTAGACGGGGACATCTACTTTGTTTGTTGGGATTCTGAATTGATTCCACCCAAGACAATTGATCCAATGGAGTATGATTCTGCGAAACCTATTGTATTGGATCATGATGTGGAGATTGAGGAAGTGCAGAAGTATTTTACCGATTACATACTCAATGATTGTCTTGGAATAATTGCCAATGCACACACTGTCTTTGCAGACAAAGAACCTGGAAAAGCAATGGCTGATCCATGTGTTGAGCTTGCAAAGCTATTCTCAACAGCAGTTGACTTTCCAAAAACCGGTATCCCAGCAGAAATACCTCGTGGTCTTTTCCCCACAGAATATCCAGATTTCATGGAGAAGCCTGACAAACCTATCTACAAATCAAAGAATGTAATAGGAAAACTTTTTAGGGAAATTCAAGGTATTTCAACAAAGGACGGCTCTATTACATCTTTCACATTGGAAGTGGCTAAAGAGTCCTATGATTCCGACATGGAATTCGAGGGCTTTATGGATTATGTTGACGATGCATTCTATCACAAAACCAATTATGACTACAAGTTGGGAAATCTGATGGACTACTATGGTATCAAAACTGAAGCAGAAATCCTAAGTGGAAATATTATGAAAATGTCAAAATCTTTCACGAAAAAAAGGGATGCGGATGCGATTACTATGGCCGTAAGGTCCCTAAGGAAAGAGGCAAGGAGTTGGTTCACTGACAGCGGGGCTGGTGTAGATTCTGGGAGTGATGATGCATATGCAAAAGCTTCTGCTTGGTACTATGTTACTTACCATCATAGTTACTATGGTTTGTACAATGAAGGTATGCAGAGGGACCATTTTCTAAGCTTTCCATGGTGTGTTTACCATTTGCTTGTCCAAATTAAGAAGGAGAAAGCCAGGATGAAGATGCATTCGAGAATGGAACAAAGTTTCAGTCACAGGTTGCGTCTTGATTGA 3354 0.3971 MVKSKTIELYGFPHYVTVPDVKRFVEQYTGEGSVVAIKIREGKARIRTAFAIIQFTTKDHVTDMMALPSRSLSPLQYGSSYLKVREMERDIVRRPREILHSLNDVKLYFCCQISEERLSVLWREVDVRVDFGIGMRKWRFTLCHDNKTFKLELSYENIWKIELHQPRSKTTKYLLIQLIGAPRVFELYSPTSDDAYNVYEDLSKNYFSDPPDDQWIRAVDFTPCSCIGQSSALCLELPSNRDFPNFRENFAQYEESAGPYMLESGSPFSCNLDVVPMVSPPQGIQIPFDILFKVNSLVQHGCLSGSELDNAFYHLVDPTRVNVELIENALEKMYYSNDFCYEPVRWLKDQYKMYHSSNNLPRSPTISLDNGLVYVRRAQITPCKVYFCGPEINVSNRVLRKYKKHMDNFLRVSFVDEELDKLYSSDLSSRISVGGRTDIYYRILSILRNGIVIGDKKFEFLAFSSSQLRESSLWMFARTPTGDTAGSIREWMGDFSRIKNVAKYAARLGQSFGSSTETTTVSSTEIEIILDVHNKTKYVFSDGIGKISLELARRVAQKCGYDSMPSAFQIRYGGYKGVVAVDPTSSVKLSLRMSMLKYDSDNTDLDVLACSKFRPCYLNRQLITLLSTLDVEDSVFEKKQKEAVDQLNTILTDSTKAHEVLDLMSSGEVTNILKEMLICGYKPNVEPFLSMMLQTFRASKLLELRQKTRIFIPKGRAMMGVLDETRTLEYGEVFVQYSNNREDSLSHVVNGKVVVAKNPCLYPGDVRVLKAVDVPALRHMVDCVVFPQKGHRPHPNECSGSDLDGDIYFVCWDSELIPPKTIDPMEYDSAKPIVLDHDVEIEEVQKYFTDYILNDCLGIIANAHTVFADKEPGKAMADPCVELAKLFSTAVDFPKTGIPAEIPRGLFPTEYPDFMEKPDKPIYKSKNVIGKLFREIQGISTKDGSITSFTLEVAKESYDSDMEFEGFMDYVDDAFYHKTNYDYKLGNLMDYYGIKTEAEILSGNIMKMSKSFTKKRDADAITMAVRSLRKEARSWFTDSGAGVDSGSDDAYAKASAWYYVTYHHSYYGLYNEGMQRDHFLSFPWCVYHLLVQIKKEKARMKMHSRMEQSFSHRLRLD* 1118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g1025 1117 CDD RRM_SF 7 85 - -
Mtr1g1025 1117 Pfam RNA dependent RNA polymerase 380 936 IPR007855 GO:0003968
Mtr1g1025 1117 PANTHER RNA-DEPENDENT RNA POLYMERASE 4 1111 - -
Mtr1g1025 1117 PANTHER RNA-DEPENDENT RNA POLYMERASE 4 1111 IPR007855 GO:0003968
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g1025 Mtr-Chr1 11620142 11626006 Proximal
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g1025 1 11620142 11626006 Mtr1g1025 1 11620142 11626006 ECH