Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0998 ATGGTTTGTTTGGTATCTCGTTCTGGAAGGCAGATGCAAAGATACAATGAAACTGGTGGTCGTCAAGTTGTAGGGTGCATCCCATACAGATATAAACAAGACATTGATGGCAATATGGGTAATGAATTGGAAGTACTTGTTGTTAGTTCACAAAAGGGTCAATCATTTATGTTTCCAAAGGGTGGATGGGAACTTGATGAATCTTTAGAAGAAGCAGCTTGCAGAGAATCCCTTGAAGAAGCAGGAGTTATAGGAACTGTTGAGCATGAATTGGGTGAATGGAGTTTCATTAGCAAGAGATATGGTACATACTATGAAGGTCACATGTTTCCCTTACTTGTTAAGGAACAACTTGAACACTGGCCTGAGAAAAATCTACGTACAAGAATATGGATGAATGTTGTTGAAGCAAGAGATGTTTGTCAGCATTGGTGGATGAAGGAAGCTTTAGATATACTTGTTGATAGGTTAACTCTACAGAAAAATAAGAACATTTAG 498 0.3815 MVCLVSRSGRQMQRYNETGGRQVVGCIPYRYKQDIDGNMGNELEVLVVSSQKGQSFMFPKGGWELDESLEEAACRESLEEAGVIGTVEHELGEWSFISKRYGTYYEGHMFPLLVKEQLEHWPEKNLRTRIWMNVVEARDVCQHWWMKEALDILVDRLTLQKNKNI* 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0998 165 PANTHER NUDIX HYDROLASE-LIKE PROTEIN 1 165 - -
Mtr1g0998 165 CDD Nudix_Hydrolase_9 22 147 - -
Mtr1g0998 165 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 5 156 - -
Mtr1g0998 165 ProSiteProfiles Nudix hydrolase domain profile. 19 154 IPR000086 -
Mtr1g0998 165 SUPERFAMILY Nudix 20 157 IPR015797 -
Mtr1g0998 165 Pfam NUDIX domain 42 139 IPR000086 -
Mtr1g0998 165 PANTHER DIPHOSPHOINOSITOL POLYPHOSPHATE PHOSPHOHYDROLASE 1 165 - -
Mtr1g0998 165 ProSitePatterns Nudix box signature. 61 82 IPR020084 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g0998 Mtr-Chr1 11421311 11422919 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g0998 1 11421311 11422919 Mtr1g0998 1 11421311 11422919 ECH