Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0996 ATGTCATCATCACCAATTGCCACCCCTTCTCTACCACCAACCACCGTCTCATCACCACCCTACGACCGTGTGAAAGCCTTGAAAGAATTCGACGAAACAAAATCCGGCGTAAAAGGCATAATCGACTCCGGAATCAAAACCATTCCATCTTTCTTCATCCATCCACCTGAAACCCTATCTGACCTCACTCCACGATCAGATTTCCCCCAACCGAAAATCCCCACAATCGACCTCTCCGCCGTCCACCACTCCCGCGCCGCTGTGGTTGAACAACTTCGTTCCGCCGCGAGTACAGTTGGATTCTTTCAAGTGATCAACCATGGAGTCGCGCCGGAATTGATGCGAAGTGTGATCGGTGCTATGAAGAAGTTTCATGAACAGCCCGCGGAGGAGAGGAAGAAGGTGTACCGTAGGGAGATGGGAATTGGTGTTTCGTATATTTCGAACGTTCATCTGTTCGCTTCTAAAGCTGCCAGCTGGCGTGACACACTCCAGATTAGGATGGGACCTGTCCCAACGGAAGAGAAGGAGATTCCGGAGGTATGCAGGAAGGAGGTGATGGAGTGGGATAAAGAAGTGGTGTGTGTGGGAGATATTTTGCTTGGTTTGTTGAGTGAAGGGTTAGGATTAGGTGAAGAAAGGTTCACAGAATTGGGTTTGTCTCAAGGGAGGGTGATGGTTGGCAACTATTACCCATTTTGCCCTCAGCCTAATCTTACTGTTGGACTCAATTCCCATGCAGATCCAGGGGCATTGACGGTATTGTTGCAGGATCATATTGGTGGCTTACAGGTTAGGACCCAACATGGTTGGATTGATGTAAAACCCCTTGATGGAGCTTTGGTCATTAACATTGGAGATTTACTTCAGATAATTTCGAACGAAGAGTATAAGAGTGCTGATCATCGTGTATTAGCCAATCCTTCTAACGAGCCACGAGTCTCAATTGCTGTTTTCCTAAACCCGGGTAATAGGGAGAAGCTCTTTGGTCCTTTACCAGAGCTAACATCAGCAGAGAAGCCATCTCTTTATAGAGATTTCATGCTCAAAGAATTCATGACAAAGTTCTTTAAGAAAGAGCTTGATGGTAAATTATTGACTAATTTCTTCAGAAAGTGA 1119 0.4638 MSSSPIATPSLPPTTVSSPPYDRVKALKEFDETKSGVKGIIDSGIKTIPSFFIHPPETLSDLTPRSDFPQPKIPTIDLSAVHHSRAAVVEQLRSAASTVGFFQVINHGVAPELMRSVIGAMKKFHEQPAEERKKVYRREMGIGVSYISNVHLFASKAASWRDTLQIRMGPVPTEEKEIPEVCRKEVMEWDKEVVCVGDILLGLLSEGLGLGEERFTELGLSQGRVMVGNYYPFCPQPNLTVGLNSHADPGALTVLLQDHIGGLQVRTQHGWIDVKPLDGALVINIGDLLQIISNEEYKSADHRVLANPSNEPRVSIAVFLNPGNREKLFGPLPELTSAEKPSLYRDFMLKEFMTKFFKKELDGKLLTNFFRK* 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0996 372 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 222 322 IPR005123 -
Mtr1g0996 372 MobiDBLite consensus disorder prediction 1 20 - -
Mtr1g0996 372 PANTHER OXIDOREDUCTASE, 2OG-FE II OXYGENASE FAMILY PROTEIN 17 360 - -
Mtr1g0996 372 PANTHER 1-AMINOCYCLOPROPANE-1-CARBOXYLATE OXIDASE HOMOLOG 4-LIKE 17 360 - -
Mtr1g0996 372 Gene3D - 28 354 IPR027443 -
Mtr1g0996 372 SUPERFAMILY Clavaminate synthase-like 34 363 - -
Mtr1g0996 372 Pfam non-haem dioxygenase in morphine synthesis N-terminal 73 169 IPR026992 -
Mtr1g0996 372 Pfam 2OG-Fe(II) oxygenase superfamily 225 322 IPR044861 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g0996 Mtr-Chr1 11399845 11407018 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g0996 17 369 Glycosyltransferase AT5G59530 43.646 3.38e-98 294
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g0996 1 11399845 11407018 Mtr1g0996 1 11399845 11407018 ECH