Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0989 ATGGAAAGAGATTTTTTGAGTCTTTGCTCAAAAGAATCATCACCTGAGATTAACAATGAAGGGTCAAAAAACTCAGGTTTTTCAAATGTTTCAGCAGTAAAATGGCCTTTCTTGAACAAAGTCGCTGTTCATTCATATTTGACGCCTTTTAAAGTTTCTGAAGACGATAAGGCTAAAATGATATCTTCTGGTTTCATACAGAACTCTTTCAAACACGATGGACAAGTTGGCATTCATTTTTCTGTGAATCAGTATCCTGTACAACACAATGTGAATTTTATGAATCGTCATCATGATGTGAAGATGTTTCCAATTTCCAATCAAGCAAATTCACTTTCTGCGGTACATCCGCTCCTAAAAAATCATCTTGCAACTTTTGGTCAGAATATAAATGGTGCTAATGCGAAGCAATCACTACTTGGTGGATTACCGGTTACCGCACCTCATTCAGTTCTTCCGATCGTTGGTACTGTTGCCGGTTTGGTTGAACCATGTGAGAAACCATCTGCACCTGCTCCTCAACTTACCATGTTTTATGGCGGTACTGTGAACATCTTCAATGATATCACTCCTGAGAAGGCACAAGCCATCATGTTGTTGGCTGGAAGTGGCTTATCTGCAGCTTCAAACAGGGCTCAACCTGAAGTTCAGGCATCTAGCTCGAAATTCGCATCAGGTGATGATGGTTTGCCTATAAGTCCACCTGTATACATACCACCCTGCTCTGGTATTTCAAGTCCTTTATCTGTTTCTTCACACACTGGTCCACAGCCAGGGAGTGGCTCAAGTAGCAGTGATGAGTTTATGGCTGCTAAAACATCTAGAGGCCCTACTCCTACCACATCTGCTTGCAAAGTTGTGACTCCAAAAGTAGTCAATGCAACCACCATGATTCCATCAGCTATACCGCAAGCTCGCAAAGCATCATTGGCTCGATTTTTGGAGAAGCGCAAGGAAAGGGTGATGAGTACAGCACCATATAACCTCAACAAGAAATCTGAGGATGCACAAATGCCGAATTCAATGGGTGCTAACATCTCTGCGACCACTGGTACTGCTAATATGCTGGTAGCAAACCAAGGATAA 1086 0.4217 MERDFLSLCSKESSPEINNEGSKNSGFSNVSAVKWPFLNKVAVHSYLTPFKVSEDDKAKMISSGFIQNSFKHDGQVGIHFSVNQYPVQHNVNFMNRHHDVKMFPISNQANSLSAVHPLLKNHLATFGQNINGANAKQSLLGGLPVTAPHSVLPIVGTVAGLVEPCEKPSAPAPQLTMFYGGTVNIFNDITPEKAQAIMLLAGSGLSAASNRAQPEVQASSSKFASGDDGLPISPPVYIPPCSGISSPLSVSSHTGPQPGSGSSSSDEFMAAKTSRGPTPTTSACKVVTPKVVNATTMIPSAIPQARKASLARFLEKRKERVMSTAPYNLNKKSEDAQMPNSMGANISATTGTANMLVANQG* 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0989 361 PANTHER PROTEIN TIFY 7 13 350 - -
Mtr1g0989 361 SMART tify_2 168 203 IPR010399 -
Mtr1g0989 361 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 13 350 IPR040390 -
Mtr1g0989 361 ProSiteProfiles Tify domain profile. 168 203 IPR010399 -
Mtr1g0989 361 Pfam Jas motif 303 327 IPR018467 -
Mtr1g0989 361 MobiDBLite consensus disorder prediction 1 23 - -
Mtr1g0989 361 Pfam tify domain 171 202 IPR010399 -
Mtr1g0989 361 MobiDBLite consensus disorder prediction 247 282 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g0989 Mtr-Chr1 11341396 11345428 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g0989 33 333 Tify Gene Family AT3G17860 33.856 1.12e-33 125
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Mtr1g0989 tify 9.6e-16 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g0989 1 11341396 11345428 Mtr1g0989 1 11341396 11345428 ECH