Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0988 ATGGATCAATCTCAAAATCAAAGATCAATTACAACAACAACATCACAATCGCGTTCTCTTCAATTCCACCCAGCGCGTGTTCCAATTCTCGATCTCTTCAACCTCTACTTAGGACTTGGAAGAAACAGTCGTAACAAACCTGACGACTCAATCCGTGAACCACCGAACAAAACGCAGAAACGTGTGCACGCGATTAACAGAGAGCTTCCACCGCCGAATGAGCAATTCATTGTTGATTTTGAGCAGCTTCAGAGTCAGTTTCCTGACCATGAGCAATTGCGTTCTGTGACAGAAGCTATTCTTATACCGCTGGTCGTACAGTGTAGTGGTCATGGGCCACGGTCAGATTTTCTGCTTTTTGTTTTACGGAGCTTGTGCGGTATTGGGTGCATTAACTGGGACACCTTTCTTCCGGCCCTTGTTTCTTCAGTTTCTTCAGCAGAAATACCGGTTGGTCAAACGAGTCAAGCAGTGTCAACAGTTACCTCCTCTAGCTTATCACAGTCGGGAATGCTGCCTCCGCCAAGCACAATTGCTAATTCTTCTAATTTTCAGTCATCAAATCCCGCATCTCCATTGACTTCTGTCCATACTATTGGCTCCCCTGCACAGTCATCTATTGAGCCGTTGTCTTGTGCAGCTCTATCTCCTGTAAAATCATCTGATATTTCCTCGGCTGGACAACAGTCTAAACAAAGAGGTAGCCCATCTGTTAGAAATAATGATATCAGTTACAGTAGCCTTCGCCAGCTATGTTGCAAGATTATTTTAACTGGTCTTGAGTTCAGTTTGAAACCCATGACATATGCCGAAATCTTCAACCATATGCTGAACTGGCTGGTGAATTGGGACCAGGGACAACAAGGAGTTGATGAATCTGATAATCAAAAGTCATGGAGACCTGACAATGCCTTAGTTGCATGGCTACATAGTTGCTTGGATGTGATCTGGCTTTTAGTTGACGAGGGAAAATGTCGGGTTCCCTTTTATGAATTATTACGCAGTGATTTGCAATTCATGGAGAATATACCTGATGATGAAGCATTATTTACACTTATCTTGGAGATCCACAGGAGACGAGATATGATGGCTATGCACATGCAAATGTTAGACCAGCATCTACATTGCCCTACATTTGGGACTCATCGGATCCTGAATCAGACAACACCTACTATTTCAGGTGAAGGAATAGCACATTTGCGCCTATCACCAATCTCATATTTAAGTGTGCTTGGGGAACCATTGAACGGAGAGGATATTGCAATCTCTATTCAGAAGGGAAGTTTGGACTGGGAGAGAGCTGTACGTTGCATCAGGCATGCTCTTCGTACTACACCTTCACCTGATTGGTGGAGACGGGTACTGGTACTGGCTTCTCCCTACAGGCCTTCAGCTCAAGGGCCTACTGCTGGTGCTGTTTTTTCTACGGAAATGATCTGTGAGGCAACTATTGATAGAATCGTAGAACTATTGAAATTAACAAATTCAGAGATAAATTGCTGGCAGGAATGGCTTGTCTTCTCTGATATTTTCTATTTTCTTATGAAAAGTGGGTGCATTAATTTTGTCGATTTTGTGGACAAGCTGGTGTCACGTCTTGCAGAAGGTGATCATCATACGCTCAAGACAAATCACGTGACTTGGCTGCTTGCACAGATCATACGAATTGAGCTGGTTATGACTGCTTTGAATTCAGATTCTAGAAAGGTGGAAACAACCAGAAAGGTATTATCATTTCATAGAGAGGACAGAAGTTCAGATCCTAATAGTCCTCAAAGTATCTTGCTTGATTTCGTAAGCAGTTGTCAAAATTTACGCATATGGTCATTGAACACATCAGCCAGAGAATACCTGAATAACGAACAGCTTCAAAAAGGAAAGCAAATAGATGAATGGTGGAGACAAGCAAGCAAAGGAGACCGAATGATGGATTATATGAATATGGATGAACGCTCAATAGGGATGTTTTGGGTTGTGACCTACACAATGGCACAACCTGCTCTTGAAACAGTAATGAATTGGTTAACTTCTGCTGGAGTTATTGACTTGGCACCAGCAACAAATCTACAACCACCTGAAAGATTAGTTTGTACACGAGAAGTTAACCCCTTGCCCATGTCATTGATATCGGGGTTTTCGATGAACTTATGTTTGAAGCTGTCTTATCAAATGGAAGATTCTCTGTTTTCTGGACAGGTTTTACCCAGCATTGCAATGGTTGAAACTTATACCAGATTGCTGCTTATTGCACCTCATTCACTTTTCCGTTCACATTTCATTCATTTGGGGCAAAAGAGTCCTTCTTTGTTGAGCAGGCCTGGTGTAACACTTTTGGTGCTTGAGATATTGAACTACAGACTACTTCCACTTTACAGGTATCAGGGAAAAAGCAAAGCCTTGATGTATGATGTTACAAAGATAATTTCTGCTCTAAAAGGAAAACGGGGAGATCATCGAGTATTCAGATTAGCTGAAAATCTGTGCCTGAATCTTATATTCTCATTGAGGGATTTCTTTTTGGTCAAAAGGGAAGGAAAGGGCCCAACGGAATTTTCGGAAACTTTGAACCGAGTGACTGTTGTAACACTTGCTATACTTATTAAGACTCGCGGGATTGCAGATGCTGATCACCTGCCTTATCTCCAAAACATGTTGGAACAAATAATGGCAACCAGCGTACATACCTGGTCAGAAAAAACACTACGATACTTCCCGTCTGTTCTGCGTGAAGCATTGAGTGGTCGACCGGATAAAAGGAGCCTTGCAATCCAAACATGGCAGCAGGCAGAACAAACGGTTATACACCAGTGCAACCAGCTTCTTTCACCTTCGGCAGATAGTAATTATGTTATGACCTACATCAACCATAGTTTCCCTCAGCATAGACAGTATTTGTGTGCTGGTGCATTGATACTAATGCAAGGACATGCAGAGAACATTAACAGTGGAAACCTGGGACGTGTACTGAGGGAATTTTCTCCTGAAGAAGTGACATCTAACATTTACACAATGGTTGATGTTATGCTTCATCATATGCAAATAGAGCTTCAACAAGGACACTTGATTCAGGACCTTATGTTAAAAGCCATTTCAAGTCTTGCTTTTTTTGTTTGGACAAATGAGATACTTCCTCTGGATATCTTGCTTCTTGCACTTACCGACCGTGATGATGATCCACATGCTTTGCGTATTGTGATTAGTTTGCTTGATAGGCAAGAGCTTCAGCAGAGAGTAAAACTCTTTTGTTTAACTCGTGGGCACCCTGAACATTGGCTATACACAGGAATGTTCAAGCGGGTTGAGCTGCAAAAGGCTCTTGGAAATCATCTTTCATGGAAGGATAGGCAACCTGTGTACTTTGATGATATTGCAGCACGCTTGCTTCCAATTATCCCCTTAATAATTTACAGACTTATTGAAAATGATGCAATGGATACAGCAGAAAGACTACTGGCCCTATATTCTCCATTGCTTGCTTATTACCCTCTAAGATTTACATTTGTTCGTGATATACTTGCATATTTCTATGGCCATCTTCCTGGAAAGCTCATTGTTCGAATACTCAATGTACTTGACATCAGTAAGATTCCCTTTTCAGAGTCATTCCCACAGCAAATAAGTTCGCCAAATCCTGCCATGTGCCCTCCTCATGACTATTTTACGACTCTTTTGTTGGGAATAGTAAATAATGTCATTCCTCCATTACATAACAACTCAAAATCGGGATCCATAGGAGATTCATCAAACGGTGCACAACGTACTTCACAAAGCAAGCCACCAGCTGTCTCTCAGTCTGGGCCAGCAAATGCTTCAGAGAGTCAAAAGGCATTCTACCAAATTCAGGATCCTGGCACATATACCCAGCTAGTTCTTGAGACTGCTGTTGTTGAAATACTTTCCCTTCCTGTGTCTGCTTCTCAGATAGTACAATCACTTGTTCAAATTGTTGTTAATATACAACCAACATTGGTCCAGTCTAATGATTCTTTCAACGGCTCCTCTAATGGTGTAGGGCAAGGTTCAGTGTTGCCAACATCACCTTCAGGGGGAAGCACAGATTCCATAGGTGCAAGTAGATCAACTCCTTCAACTTCTGGAGTAAATACCACTAATTTTGCTTCACGAAGTGGTTATACATGTCAACAACTGTCTTGCTTGTTGATTCAAGCTTGTGGCCTCCTTCTGGCTCAGCTTCCTTCTGATTTTCATTCACAACTTTACTTGGAGACAACACGTATAATAAAAGAGAATTGGTGGCTTACAGATGTGAAAAGGTCTCTTGCGGAAATAGACTCTGCTGTTGGCTATGCTTTGTTAGATCCAACATGGGCTGCACAGGATAATACCTCCACAGCCATCGGGAATGTGGTTGCTTTGCTTCATTCTTTCTTCAGTAACCTGCCTCAAGAATGGCTTGAAGGAACTAATGTTATCATCAAGCAACTTCGGCCAGTAACGTCAGTTGCAATGTTGAGGATAGCATTTCGTATAATGAGCCCCCTCCTTCCAAAACTTGCCAATGCTCATGCACTTTTCAACAAGACCCTATCTATACTCTTGAGTGTATTAGTGGATGTATTTGGAAAGAATTCCCAGACATCAACTGCTGTTGATGCATCAGAGATAGCAGATATCATTGATTTCCTTCATCATGTCATTCACTATGAAGGGCAGGGAGGGCCTGTGCAGGCTAGCAGCAAACCTCGACCAGATGTTCTGGCACTCATTGGAAGGGCAGCGGAGAGTTTACGTCCAGATATTCAACATCTGCTCTCACACTTGAATACTGATGTGAATTCTTCTGTTTATGCAGCTTCTCATCCAAAGTTAGTCCCAAATCCAACTTAG 4848 0.4212 MDQSQNQRSITTTTSQSRSLQFHPARVPILDLFNLYLGLGRNSRNKPDDSIREPPNKTQKRVHAINRELPPPNEQFIVDFEQLQSQFPDHEQLRSVTEAILIPLVVQCSGHGPRSDFLLFVLRSLCGIGCINWDTFLPALVSSVSSAEIPVGQTSQAVSTVTSSSLSQSGMLPPPSTIANSSNFQSSNPASPLTSVHTIGSPAQSSIEPLSCAALSPVKSSDISSAGQQSKQRGSPSVRNNDISYSSLRQLCCKIILTGLEFSLKPMTYAEIFNHMLNWLVNWDQGQQGVDESDNQKSWRPDNALVAWLHSCLDVIWLLVDEGKCRVPFYELLRSDLQFMENIPDDEALFTLILEIHRRRDMMAMHMQMLDQHLHCPTFGTHRILNQTTPTISGEGIAHLRLSPISYLSVLGEPLNGEDIAISIQKGSLDWERAVRCIRHALRTTPSPDWWRRVLVLASPYRPSAQGPTAGAVFSTEMICEATIDRIVELLKLTNSEINCWQEWLVFSDIFYFLMKSGCINFVDFVDKLVSRLAEGDHHTLKTNHVTWLLAQIIRIELVMTALNSDSRKVETTRKVLSFHREDRSSDPNSPQSILLDFVSSCQNLRIWSLNTSAREYLNNEQLQKGKQIDEWWRQASKGDRMMDYMNMDERSIGMFWVVTYTMAQPALETVMNWLTSAGVIDLAPATNLQPPERLVCTREVNPLPMSLISGFSMNLCLKLSYQMEDSLFSGQVLPSIAMVETYTRLLLIAPHSLFRSHFIHLGQKSPSLLSRPGVTLLVLEILNYRLLPLYRYQGKSKALMYDVTKIISALKGKRGDHRVFRLAENLCLNLIFSLRDFFLVKREGKGPTEFSETLNRVTVVTLAILIKTRGIADADHLPYLQNMLEQIMATSVHTWSEKTLRYFPSVLREALSGRPDKRSLAIQTWQQAEQTVIHQCNQLLSPSADSNYVMTYINHSFPQHRQYLCAGALILMQGHAENINSGNLGRVLREFSPEEVTSNIYTMVDVMLHHMQIELQQGHLIQDLMLKAISSLAFFVWTNEILPLDILLLALTDRDDDPHALRIVISLLDRQELQQRVKLFCLTRGHPEHWLYTGMFKRVELQKALGNHLSWKDRQPVYFDDIAARLLPIIPLIIYRLIENDAMDTAERLLALYSPLLAYYPLRFTFVRDILAYFYGHLPGKLIVRILNVLDISKIPFSESFPQQISSPNPAMCPPHDYFTTLLLGIVNNVIPPLHNNSKSGSIGDSSNGAQRTSQSKPPAVSQSGPANASESQKAFYQIQDPGTYTQLVLETAVVEILSLPVSASQIVQSLVQIVVNIQPTLVQSNDSFNGSSNGVGQGSVLPTSPSGGSTDSIGASRSTPSTSGVNTTNFASRSGYTCQQLSCLLIQACGLLLAQLPSDFHSQLYLETTRIIKENWWLTDVKRSLAEIDSAVGYALLDPTWAAQDNTSTAIGNVVALLHSFFSNLPQEWLEGTNVIIKQLRPVTSVAMLRIAFRIMSPLLPKLANAHALFNKTLSILLSVLVDVFGKNSQTSTAVDASEIADIIDFLHHVIHYEGQGGPVQASSKPRPDVLALIGRAAESLRPDIQHLLSHLNTDVNSSVYAASHPKLVPNPT* 1616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0988 1615 MobiDBLite consensus disorder prediction 177 202 - -
Mtr1g0988 1615 MobiDBLite consensus disorder prediction 1239 1275 - -
Mtr1g0988 1615 Pfam Mediator complex subunit 23 497 1178 IPR021629 -
Mtr1g0988 1615 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 23 1 212 IPR021629 -
Mtr1g0988 1615 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 23 226 1608 IPR021629 -
Mtr1g0988 1615 PANTHER BNAA09G30010D PROTEIN 1 212 - -
Mtr1g0988 1615 PANTHER BNAA09G30010D PROTEIN 226 1608 - -
Mtr1g0988 1615 MobiDBLite consensus disorder prediction 1330 1368 - -
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g0988 1 11315100 11333484 Mtr1g0988 1 11315100 11333484 ECH