Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo7g02074 ATGGTTTTATCATGGACAAAAGGTAGTAGGGTTTTCCGTCGTGCAAGAAAAGGAAAAGAGTTATTATCAAATTCATGCAACGATTTACAAGTGGAGATAGCAATTCCAACTCATTTTCGTTGCCCAGTAACACTTGACTTAATGAAAGACCCCGTTACACTTTCAACCGGCATAACCTACGATAGAGACAGCATCGAAAAATGGTTTGAATCAGGTAACAACACATGTCCCGTTACAAAAACTGAGTTAACATCCTTTGACATCGTACCAAATCACTCCCTTCGTAGAATGATTCAAGATTGGTGTGTTCAACACCGTTCCTATGGCGTCGAAAGAATCCCAACACCGCGTATTCCAGTAACTCGTTATGAAGTTACAGATACGTGTAATAGGATTCTTTCTGCGGCGCAACAAGGAGATGAGAGCAAGAGTTTTGAATTGGTGAGAAAGATCAAGGGTTGGGGAAAAGAGAGTGAGAGGAACAAGAAGGTTATAGTTTCAAATGGTGCTTCTCTTGTTCTTGCTAAGGTTTTTGATTCTTTCTCACGTGGTTTGATTGAGAAGAACGTTGTTCTTTTGGAAGAGATTTTGGAAGTGCTGACATGGATGCGTCCTTTGTCTGAAGAGGGTAGATTTGTCTTTTTGGGATCTTCAAATTCTTTGAGTTGTTTGGTTTGGTTCTTAAATGATCAACAAAAAATTTCAACTAGGCAAAATTCTTCTTTGTTGCTTAAGGAAATGAATGTTGAATCATTGGTGAAAATTGAAGGGATTGTTGACTCTTTGGTGAACATGGTTAAGGTTAATGTTGAGATTGGGACAGCTTCTACAAAAGCATGTTTGTCGACAATTTTTCATTTGGTTTACTCAACAAAGAGTAGAAAAGTGATATTGGAGAGGTTTGTTGAATTGGGTTTGGTTACAATTTTATTGGAGATTCTTGTTGATGCTGAAAAAGGAGTTTGTGAGAAAGCTTTAGGTGTGTTGAATTGTCTTTGTGATAGTAAAAATGGGGTGCAAATAGCAAAGTCAAATGCTTTGACTTTGCCTCTTGTTATTAAGAAACTTTTGAGGGTTTCTGAATTGAGTTCTAGTTTTGTTGTTTCTATTGTTTACAAGATTTGTGACAAGGCTGAGGAAGGTATTTTGATTGAGGCAATTCAACTTGGGATGTTTCAGAAACTACTTGTTTTGTTGCAAGTAGGTTGTGCTGAGAGTACCAAGGAGAAAGCTACTGAGTTGTTGAAATTGTTGAATGGATATAAAAGCAAAGCAGAGTGTGTTGATTCATCATCATTGGATTTCACACACCTTAAGAAGCCATTCTAA 1329 0.374 MVLSWTKGSRVFRRARKGKELLSNSCNDLQVEIAIPTHFRCPVTLDLMKDPVTLSTGITYDRDSIEKWFESGNNTCPVTKTELTSFDIVPNHSLRRMIQDWCVQHRSYGVERIPTPRIPVTRYEVTDTCNRILSAAQQGDESKSFELVRKIKGWGKESERNKKVIVSNGASLVLAKVFDSFSRGLIEKNVVLLEEILEVLTWMRPLSEEGRFVFLGSSNSLSCLVWFLNDQQKISTRQNSSLLLKEMNVESLVKIEGIVDSLVNMVKVNVEIGTASTKACLSTIFHLVYSTKSRKVILERFVELGLVTILLEILVDAEKGVCEKALGVLNCLCDSKNGVQIAKSNALTLPLVIKKLLRVSELSSSFVVSIVYKICDKAEEGILIEAIQLGMFQKLLVLLQVGCAESTKEKATELLKLLNGYKSKAECVDSSSLDFTHLKKPF 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo7g02074 442 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 19 112 IPR013083 -
Mepo7g02074 442 ProSiteProfiles U-box domain profile. 34 108 IPR003613 GO:0004842|GO:0016567
Mepo7g02074 442 Pfam U-box domain 35 106 IPR003613 GO:0004842|GO:0016567
Mepo7g02074 442 FunFam RING-type E3 ubiquitin transferase 29 111 - -
Mepo7g02074 442 CDD RING-Ubox_PUB 36 87 IPR045210 -
Mepo7g02074 442 Gene3D - 119 431 IPR011989 -
Mepo7g02074 442 SMART Ubox_2 38 101 IPR003613 GO:0004842|GO:0016567
Mepo7g02074 442 SUPERFAMILY ARM repeat 131 420 IPR016024 -
Mepo7g02074 442 PANTHER WDSAM1 PROTEIN 32 428 IPR045185 GO:0061630
Mepo7g02074 442 SUPERFAMILY RING/U-box 32 111 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo7g02074 Mepo-Chr7 31071210 31073007 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo7g02074 10 442 U-box Gene Family AT5G37490 42.727 1.05e-110 331
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo7g02074 7 31071210 31073007 Mepo7g02074 7 31071210 31073007 ECH
Mepo3g05355 3 67028466 67030078 Mepo7g02074 7 31071210 31073007 PCT