Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mepo5g01008 | ATGGCAAAAAACATAGACAAAACAAGTTCTGATTCTGAAAATTCTTTATGTTCATCAAATTCAAGCCCTCCAATGAGTAATAAGTATAGGTACATGTTTAATAGACTATTCAGGTTTGCCAATTCATGGAAGAAAAGTAACTTGCCAAGAGGTAGAAGAATTTTCCACAGAGATGTTGAAAAAGAAGAATTCCAATATGCTAGTAGTCACTGTCTTTCATCCTACTACAGTGTTTTTGTGGTTAGATTAGCAATCATGGTAATGTTAGCCATCTTGATAGGGCTATTGACCATATTAACATGGCATTTCACAAAGATTTATACGAAGAAATCATTGAGTAGTTTGGCGTATGGTCTGCGTTATGAACTTCTGCAACGTCCGATTTTGAGGATGTGGAATATTTTGAATGCTACTTCTGAAATTACAACAGCTCAGGTCAAGTTGTCTCAGTATGTTATCAGACGATATAGCAATCCTGCATCTCAAGCTGAGCAAGTTGAGCTATATGAAGCAATGAGGGCAGTAACATGGTCACTATTTGCTAGTAGAAAAGCTCTAAACTCAATAACAATCAATTACAAGAATGGATTTGTTCAAGCATTCCATAGAGATCTAAAAGATAACAATACATTTTACATCTACTCAGATCTTTCAAATTACTCCATGGTTGCAACAACCTCAAATATGGTCAAGTCCCTTTCAACTCATCAAGCTTGGGATGATAAAACACTTCATGGCAACTTTTCAGCAATTTGGTATAGGGAACCACTTGATCCTGTCACAGGCGAAAAAATCGGAAAAGCAATGAAAATTGCACCAGAAGATTTGATCAATATAGCAGGACTTTCACAAGTTCCTGATGGTGTAGCTACATGGCATGTAGCAGTTAGTAAATTTACAGATTCGCCTTTGCTTTCGGCAGCTTTACCTGTTTGGGATTCTTCTAATAAAAGTATTATGGCTGTTGTTGGTGTTACAACCGCATTTTATAGTGTTGGACAGTTAATGAGAGAACTTGTTGAGATGCATAGTGGTCACATGTATTTGACTTCTCAACAAGGCTATTTACTTGCAACTTCTACAAGTGCACCGTTACTTACAAATTCGACCAAGCCACCTCCAAAGCTTAAAATGGCGGTGGATTGTGAAGATGATATAATAAGACTTGGAGCTGAGTGGTTGCAGAGAACTTATGGGAATCATTTTCCTAATTCAACTCATGAGGTTCATGTTGAGAATGCTAAGCTAGGGAATCAGCAATATTACATTGACTCATTCTACCTAAACTTGAAGAGACTTCCTTTGGTAGGTGTAATCATCATACCAAGAAAGTATATCATGGGACAGGTGGATGAGAGATCTTTCAAAACTTTGGTTATTCTGATATCTGCATCTCTATGCATTTTTGTCATTGGATGTGTTTGCATTTTGATATTGACAAATGGAGTGTCAAAGGAAATGAATCTAAGAGCAGAACTGATAAGTCAACTTGAAGCAAGAAGGAAGGCAGAGGCATCAAGCAACTATAAAAGTCAATTCCTTGCAAACATGAGTCATGAACTAAGGACACCTATGGCAGCAGTAATTGGATTGCTCGACATTCTTATATCTGATGATTGTCTCACAAATGAACAATATTCAACAGTTACTCAAATAAGAAAATGTTCAACAGCTCTACTTCGTCTTCTTAACAACATATTGGATCTAAGCAAGGTGGAGTCTGGAAAACTTGTACTAGAAGATGCAGAATTCGACTTGGGACGCGAACTTGAAGGGCTTGTAGATATGTTTTCTGTTCAGTGCATTAATCACAATGTAGAGACTGTTTTAGACCTTTCTGATGATATGCCAAAATTAGTTAGAGGTGACTCTGGCAGGGTGGTTCAAGTATTTGCAAATTTGATCAACAATTCAATTAAGTTTACTACATCTGGTCATGTTATTCTACGAGGATGGTGTGAATATCCAAACTCTTGCAACGATAGTCCGAATTTTTATCTTGATCAGAAGAAATCAAGAAATTTACATAAGAGCAAAGAGAAGCCAAATACAAGTCATGCAAAGAGAATATCTATGAGAGATAACAAAGTGATACTTTGGTTTGAAGTTGAGGACACAGGCTGTGGTATTGATCCAAGCAAATGGGATTCTGTGTTTGAAAGCTTTGAGCAAGCTGATCCATCAACTACTCGACTGCATGGAGGGACTGGTCTTGGTCTTTGCATCGTTAGGAACTTGGTTAATAAGATGGGTGGAGAAATCAAGGTTACCAAAAAGGAGGGTCGGGGAACATTGATGAGATTATGTTTGCTTCTTAGTGCACCAATGGATGTCACAGAGCAACATGCTTTAAATTTGACAGACAATGGCTTAGTGGTATTGCTTGCACTACAAGGAAACATGGGTAGAATAATAACATCAAAGTGGTTAACAAAAAAAGGGGTGTGCACAATGGAAGCATCTGAATGGAATGGACTAACTCAAATTTTGAGGGAACTCTTTCATGCAAGAAGTTCAATCCATAACAGTAACAACTTTGATGCACACTATCCAATAAATCTTGAAGGATTTAAGTCTAAACTACTAAGCATCAAAGACATGAGGAATCCAATTTTTGTCATTGTAGTTGACATTGGTTTGCTTGACTTAAGCACAGATATATGGAAAGAACAACTTAACTTCCTTCACAAGTATTTTGGACGAGCAAAATTTGTGTGGATGCTGAATCATGACACATCAAATACCATAAAGACGGAGCTTCGTCGGAAAGGACACTTATTAATGGTTAACAAACCTCTTTACAAAGCAAAAATGATTCATATACTGGAAGCTGTTATAAAAGAGAGAAATCATGAGTTGCAAAAGAAAAACATGAAAGAGGGTGATTTGCATGAGTTTCTTGAGATTGATTCTACTCATTTTGATGCTGCTACTAGCTCTGATGATTCTGATATATCTGAAATTAGAGAAAAACCAATTTTAAAGTTAACCAATGAAAATGAACATTTGAAAGAAAATAATCCAAGGAAAGAAGAATCTTGTTCCTCTGAAGACAACAAAGCTAAAGAAACAAACTTTGCAACACAAGCTTATGATAGGGTGACAAGGTCAAGAAAAGAAGTGAATGATAAGAAATCACTTGAGGGGTTAAGGATTTTGCTTGCAGAAGATACACCAGTAATTCAAAGGGTTGCAACAATAATGCTTGAAAAAATGGGAGCTGTTGTTGTTGCTGTAGGTGATGGACAACAAGCAGTGGATGCTCTTAATTATATGGTAAGTTCTGAAGATAGTAGAAGAGAGTCTCTCCAGAAGGACAGAAATACAAGAACACAGACAGAGATTTTAACTTGCCATCAATATGATTTGATCCTAATGGATTGTCAGATGCCAAAGATGGATGGATATGAGGCAACAAAAGCAATAAGGAAATCAGAGGAAGGAACAGGCAAACACATTCCAATTGTTGCTCTAACAGCACATGCAATGTCTTGTGATGAAGCCAAATGCCTTAAGGTTGGCATGGATGCTTACTTAACAAAGCCAATTGACTTCAAACTTATGGTTTCAACCATTCTCTCACTCACTAAACCAACAACCTAG | 3603 | 0.3697 | MAKNIDKTSSDSENSLCSSNSSPPMSNKYRYMFNRLFRFANSWKKSNLPRGRRIFHRDVEKEEFQYASSHCLSSYYSVFVVRLAIMVMLAILIGLLTILTWHFTKIYTKKSLSSLAYGLRYELLQRPILRMWNILNATSEITTAQVKLSQYVIRRYSNPASQAEQVELYEAMRAVTWSLFASRKALNSITINYKNGFVQAFHRDLKDNNTFYIYSDLSNYSMVATTSNMVKSLSTHQAWDDKTLHGNFSAIWYREPLDPVTGEKIGKAMKIAPEDLINIAGLSQVPDGVATWHVAVSKFTDSPLLSAALPVWDSSNKSIMAVVGVTTAFYSVGQLMRELVEMHSGHMYLTSQQGYLLATSTSAPLLTNSTKPPPKLKMAVDCEDDIIRLGAEWLQRTYGNHFPNSTHEVHVENAKLGNQQYYIDSFYLNLKRLPLVGVIIIPRKYIMGQVDERSFKTLVILISASLCIFVIGCVCILILTNGVSKEMNLRAELISQLEARRKAEASSNYKSQFLANMSHELRTPMAAVIGLLDILISDDCLTNEQYSTVTQIRKCSTALLRLLNNILDLSKVESGKLVLEDAEFDLGRELEGLVDMFSVQCINHNVETVLDLSDDMPKLVRGDSGRVVQVFANLINNSIKFTTSGHVILRGWCEYPNSCNDSPNFYLDQKKSRNLHKSKEKPNTSHAKRISMRDNKVILWFEVEDTGCGIDPSKWDSVFESFEQADPSTTRLHGGTGLGLCIVRNLVNKMGGEIKVTKKEGRGTLMRLCLLLSAPMDVTEQHALNLTDNGLVVLLALQGNMGRIITSKWLTKKGVCTMEASEWNGLTQILRELFHARSSIHNSNNFDAHYPINLEGFKSKLLSIKDMRNPIFVIVVDIGLLDLSTDIWKEQLNFLHKYFGRAKFVWMLNHDTSNTIKTELRRKGHLLMVNKPLYKAKMIHILEAVIKERNHELQKKNMKEGDLHEFLEIDSTHFDAATSSDDSDISEIREKPILKLTNENEHLKENNPRKEESCSSEDNKAKETNFATQAYDRVTRSRKEVNDKKSLEGLRILLAEDTPVIQRVATIMLEKMGAVVVAVGDGQQAVDALNYMVSSEDSRRESLQKDRNTRTQTEILTCHQYDLILMDCQMPKMDGYEATKAIRKSEEGTGKHIPIVALTAHAMSCDEAKCLKVGMDAYLTKPIDFKLMVSTILSLTKPTT | 1200 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mepo5g01008 | 1200 | Gene3D | - | 1028 | 1196 | - | - | |
Mepo5g01008 | 1200 | Pfam | His Kinase A (phospho-acceptor) domain | 510 | 575 | IPR003661 | GO:0000155|GO:0007165 | |
Mepo5g01008 | 1200 | CDD | HisKA | 510 | 571 | IPR003661 | GO:0000155|GO:0007165 | |
Mepo5g01008 | 1200 | SUPERFAMILY | CheY-like | 1048 | 1196 | IPR011006 | - | |
Mepo5g01008 | 1200 | Pfam | Response regulator receiver domain | 1110 | 1191 | IPR001789 | GO:0000160 | |
Mepo5g01008 | 1200 | MobiDBLite | consensus disorder prediction | 999 | 1019 | - | - | |
Mepo5g01008 | 1200 | ProSiteProfiles | Response regulatory domain profile. | 1051 | 1196 | IPR001789 | GO:0000160 | |
Mepo5g01008 | 1200 | SMART | HisKA_10 | 509 | 575 | IPR003661 | GO:0000155|GO:0007165 | |
Mepo5g01008 | 1200 | PRINTS | Bacterial sensor protein C-terminal signature | 734 | 752 | IPR004358 | GO:0016310|GO:0016772 | |
Mepo5g01008 | 1200 | PRINTS | Bacterial sensor protein C-terminal signature | 699 | 713 | IPR004358 | GO:0016310|GO:0016772 | |
Mepo5g01008 | 1200 | PRINTS | Bacterial sensor protein C-terminal signature | 717 | 727 | IPR004358 | GO:0016310|GO:0016772 | |
Mepo5g01008 | 1200 | SMART | REC_2 | 1050 | 1192 | IPR001789 | GO:0000160 | |
Mepo5g01008 | 1200 | Coils | Coil | 993 | 1013 | - | - | |
Mepo5g01008 | 1200 | Gene3D | - | 497 | 576 | - | - | |
Mepo5g01008 | 1200 | SMART | HKATPase_4 | 622 | 774 | IPR003594 | - | |
Mepo5g01008 | 1200 | MobiDBLite | consensus disorder prediction | 1 | 22 | - | - | |
Mepo5g01008 | 1200 | Gene3D | - | 577 | 775 | IPR036890 | - | |
Mepo5g01008 | 1200 | CDD | REC_hyHK_CKI1_RcsC-like | 1052 | 1192 | - | - | |
Mepo5g01008 | 1200 | PANTHER | TWO-COMPONENT HISTIDINE KINASE | 63 | 780 | - | - | |
Mepo5g01008 | 1200 | ProSiteProfiles | Histidine kinase domain profile. | 516 | 774 | IPR005467 | - | |
Mepo5g01008 | 1200 | FunFam | Histidine kinase 1-like protein | 497 | 576 | - | - | |
Mepo5g01008 | 1200 | Pfam | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase | 622 | 772 | IPR003594 | - | |
Mepo5g01008 | 1200 | SUPERFAMILY | Homodimeric domain of signal transducing histidine kinase | 497 | 576 | IPR036097 | GO:0000155|GO:0007165 | |
Mepo5g01008 | 1200 | MobiDBLite | consensus disorder prediction | 999 | 1020 | - | - | |
Mepo5g01008 | 1200 | SUPERFAMILY | ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase | 564 | 770 | IPR036890 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Mepo5g01008 | Mepo-Chr5 | 9945156 | 9951788 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Mepo5g01008 | 28 | 1199 | Histidine Kinase Gene Family | AT2G17820 | 65.497 | 0.0 | 1581 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TR | Others | Mepo5g01008 | HATPase_c | 4.2e-24 | CL0025 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Mepo5g01008 | 5 | 9945156 | 9951788 | Mepo5g01008 | 5 | 9945156 | 9951788 | ECH | |
Mepo5g01008 | 5 | 9945156 | 9951788 | Mepo1g02152 | 1 | 22122942 | 22136798 | PCT |