Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g01008 ATGGCAAAAAACATAGACAAAACAAGTTCTGATTCTGAAAATTCTTTATGTTCATCAAATTCAAGCCCTCCAATGAGTAATAAGTATAGGTACATGTTTAATAGACTATTCAGGTTTGCCAATTCATGGAAGAAAAGTAACTTGCCAAGAGGTAGAAGAATTTTCCACAGAGATGTTGAAAAAGAAGAATTCCAATATGCTAGTAGTCACTGTCTTTCATCCTACTACAGTGTTTTTGTGGTTAGATTAGCAATCATGGTAATGTTAGCCATCTTGATAGGGCTATTGACCATATTAACATGGCATTTCACAAAGATTTATACGAAGAAATCATTGAGTAGTTTGGCGTATGGTCTGCGTTATGAACTTCTGCAACGTCCGATTTTGAGGATGTGGAATATTTTGAATGCTACTTCTGAAATTACAACAGCTCAGGTCAAGTTGTCTCAGTATGTTATCAGACGATATAGCAATCCTGCATCTCAAGCTGAGCAAGTTGAGCTATATGAAGCAATGAGGGCAGTAACATGGTCACTATTTGCTAGTAGAAAAGCTCTAAACTCAATAACAATCAATTACAAGAATGGATTTGTTCAAGCATTCCATAGAGATCTAAAAGATAACAATACATTTTACATCTACTCAGATCTTTCAAATTACTCCATGGTTGCAACAACCTCAAATATGGTCAAGTCCCTTTCAACTCATCAAGCTTGGGATGATAAAACACTTCATGGCAACTTTTCAGCAATTTGGTATAGGGAACCACTTGATCCTGTCACAGGCGAAAAAATCGGAAAAGCAATGAAAATTGCACCAGAAGATTTGATCAATATAGCAGGACTTTCACAAGTTCCTGATGGTGTAGCTACATGGCATGTAGCAGTTAGTAAATTTACAGATTCGCCTTTGCTTTCGGCAGCTTTACCTGTTTGGGATTCTTCTAATAAAAGTATTATGGCTGTTGTTGGTGTTACAACCGCATTTTATAGTGTTGGACAGTTAATGAGAGAACTTGTTGAGATGCATAGTGGTCACATGTATTTGACTTCTCAACAAGGCTATTTACTTGCAACTTCTACAAGTGCACCGTTACTTACAAATTCGACCAAGCCACCTCCAAAGCTTAAAATGGCGGTGGATTGTGAAGATGATATAATAAGACTTGGAGCTGAGTGGTTGCAGAGAACTTATGGGAATCATTTTCCTAATTCAACTCATGAGGTTCATGTTGAGAATGCTAAGCTAGGGAATCAGCAATATTACATTGACTCATTCTACCTAAACTTGAAGAGACTTCCTTTGGTAGGTGTAATCATCATACCAAGAAAGTATATCATGGGACAGGTGGATGAGAGATCTTTCAAAACTTTGGTTATTCTGATATCTGCATCTCTATGCATTTTTGTCATTGGATGTGTTTGCATTTTGATATTGACAAATGGAGTGTCAAAGGAAATGAATCTAAGAGCAGAACTGATAAGTCAACTTGAAGCAAGAAGGAAGGCAGAGGCATCAAGCAACTATAAAAGTCAATTCCTTGCAAACATGAGTCATGAACTAAGGACACCTATGGCAGCAGTAATTGGATTGCTCGACATTCTTATATCTGATGATTGTCTCACAAATGAACAATATTCAACAGTTACTCAAATAAGAAAATGTTCAACAGCTCTACTTCGTCTTCTTAACAACATATTGGATCTAAGCAAGGTGGAGTCTGGAAAACTTGTACTAGAAGATGCAGAATTCGACTTGGGACGCGAACTTGAAGGGCTTGTAGATATGTTTTCTGTTCAGTGCATTAATCACAATGTAGAGACTGTTTTAGACCTTTCTGATGATATGCCAAAATTAGTTAGAGGTGACTCTGGCAGGGTGGTTCAAGTATTTGCAAATTTGATCAACAATTCAATTAAGTTTACTACATCTGGTCATGTTATTCTACGAGGATGGTGTGAATATCCAAACTCTTGCAACGATAGTCCGAATTTTTATCTTGATCAGAAGAAATCAAGAAATTTACATAAGAGCAAAGAGAAGCCAAATACAAGTCATGCAAAGAGAATATCTATGAGAGATAACAAAGTGATACTTTGGTTTGAAGTTGAGGACACAGGCTGTGGTATTGATCCAAGCAAATGGGATTCTGTGTTTGAAAGCTTTGAGCAAGCTGATCCATCAACTACTCGACTGCATGGAGGGACTGGTCTTGGTCTTTGCATCGTTAGGAACTTGGTTAATAAGATGGGTGGAGAAATCAAGGTTACCAAAAAGGAGGGTCGGGGAACATTGATGAGATTATGTTTGCTTCTTAGTGCACCAATGGATGTCACAGAGCAACATGCTTTAAATTTGACAGACAATGGCTTAGTGGTATTGCTTGCACTACAAGGAAACATGGGTAGAATAATAACATCAAAGTGGTTAACAAAAAAAGGGGTGTGCACAATGGAAGCATCTGAATGGAATGGACTAACTCAAATTTTGAGGGAACTCTTTCATGCAAGAAGTTCAATCCATAACAGTAACAACTTTGATGCACACTATCCAATAAATCTTGAAGGATTTAAGTCTAAACTACTAAGCATCAAAGACATGAGGAATCCAATTTTTGTCATTGTAGTTGACATTGGTTTGCTTGACTTAAGCACAGATATATGGAAAGAACAACTTAACTTCCTTCACAAGTATTTTGGACGAGCAAAATTTGTGTGGATGCTGAATCATGACACATCAAATACCATAAAGACGGAGCTTCGTCGGAAAGGACACTTATTAATGGTTAACAAACCTCTTTACAAAGCAAAAATGATTCATATACTGGAAGCTGTTATAAAAGAGAGAAATCATGAGTTGCAAAAGAAAAACATGAAAGAGGGTGATTTGCATGAGTTTCTTGAGATTGATTCTACTCATTTTGATGCTGCTACTAGCTCTGATGATTCTGATATATCTGAAATTAGAGAAAAACCAATTTTAAAGTTAACCAATGAAAATGAACATTTGAAAGAAAATAATCCAAGGAAAGAAGAATCTTGTTCCTCTGAAGACAACAAAGCTAAAGAAACAAACTTTGCAACACAAGCTTATGATAGGGTGACAAGGTCAAGAAAAGAAGTGAATGATAAGAAATCACTTGAGGGGTTAAGGATTTTGCTTGCAGAAGATACACCAGTAATTCAAAGGGTTGCAACAATAATGCTTGAAAAAATGGGAGCTGTTGTTGTTGCTGTAGGTGATGGACAACAAGCAGTGGATGCTCTTAATTATATGGTAAGTTCTGAAGATAGTAGAAGAGAGTCTCTCCAGAAGGACAGAAATACAAGAACACAGACAGAGATTTTAACTTGCCATCAATATGATTTGATCCTAATGGATTGTCAGATGCCAAAGATGGATGGATATGAGGCAACAAAAGCAATAAGGAAATCAGAGGAAGGAACAGGCAAACACATTCCAATTGTTGCTCTAACAGCACATGCAATGTCTTGTGATGAAGCCAAATGCCTTAAGGTTGGCATGGATGCTTACTTAACAAAGCCAATTGACTTCAAACTTATGGTTTCAACCATTCTCTCACTCACTAAACCAACAACCTAG 3603 0.3697 MAKNIDKTSSDSENSLCSSNSSPPMSNKYRYMFNRLFRFANSWKKSNLPRGRRIFHRDVEKEEFQYASSHCLSSYYSVFVVRLAIMVMLAILIGLLTILTWHFTKIYTKKSLSSLAYGLRYELLQRPILRMWNILNATSEITTAQVKLSQYVIRRYSNPASQAEQVELYEAMRAVTWSLFASRKALNSITINYKNGFVQAFHRDLKDNNTFYIYSDLSNYSMVATTSNMVKSLSTHQAWDDKTLHGNFSAIWYREPLDPVTGEKIGKAMKIAPEDLINIAGLSQVPDGVATWHVAVSKFTDSPLLSAALPVWDSSNKSIMAVVGVTTAFYSVGQLMRELVEMHSGHMYLTSQQGYLLATSTSAPLLTNSTKPPPKLKMAVDCEDDIIRLGAEWLQRTYGNHFPNSTHEVHVENAKLGNQQYYIDSFYLNLKRLPLVGVIIIPRKYIMGQVDERSFKTLVILISASLCIFVIGCVCILILTNGVSKEMNLRAELISQLEARRKAEASSNYKSQFLANMSHELRTPMAAVIGLLDILISDDCLTNEQYSTVTQIRKCSTALLRLLNNILDLSKVESGKLVLEDAEFDLGRELEGLVDMFSVQCINHNVETVLDLSDDMPKLVRGDSGRVVQVFANLINNSIKFTTSGHVILRGWCEYPNSCNDSPNFYLDQKKSRNLHKSKEKPNTSHAKRISMRDNKVILWFEVEDTGCGIDPSKWDSVFESFEQADPSTTRLHGGTGLGLCIVRNLVNKMGGEIKVTKKEGRGTLMRLCLLLSAPMDVTEQHALNLTDNGLVVLLALQGNMGRIITSKWLTKKGVCTMEASEWNGLTQILRELFHARSSIHNSNNFDAHYPINLEGFKSKLLSIKDMRNPIFVIVVDIGLLDLSTDIWKEQLNFLHKYFGRAKFVWMLNHDTSNTIKTELRRKGHLLMVNKPLYKAKMIHILEAVIKERNHELQKKNMKEGDLHEFLEIDSTHFDAATSSDDSDISEIREKPILKLTNENEHLKENNPRKEESCSSEDNKAKETNFATQAYDRVTRSRKEVNDKKSLEGLRILLAEDTPVIQRVATIMLEKMGAVVVAVGDGQQAVDALNYMVSSEDSRRESLQKDRNTRTQTEILTCHQYDLILMDCQMPKMDGYEATKAIRKSEEGTGKHIPIVALTAHAMSCDEAKCLKVGMDAYLTKPIDFKLMVSTILSLTKPTT 1200
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g01008 1200 Gene3D - 1028 1196 - -
Mepo5g01008 1200 Pfam His Kinase A (phospho-acceptor) domain 510 575 IPR003661 GO:0000155|GO:0007165
Mepo5g01008 1200 CDD HisKA 510 571 IPR003661 GO:0000155|GO:0007165
Mepo5g01008 1200 SUPERFAMILY CheY-like 1048 1196 IPR011006 -
Mepo5g01008 1200 Pfam Response regulator receiver domain 1110 1191 IPR001789 GO:0000160
Mepo5g01008 1200 MobiDBLite consensus disorder prediction 999 1019 - -
Mepo5g01008 1200 ProSiteProfiles Response regulatory domain profile. 1051 1196 IPR001789 GO:0000160
Mepo5g01008 1200 SMART HisKA_10 509 575 IPR003661 GO:0000155|GO:0007165
Mepo5g01008 1200 PRINTS Bacterial sensor protein C-terminal signature 734 752 IPR004358 GO:0016310|GO:0016772
Mepo5g01008 1200 PRINTS Bacterial sensor protein C-terminal signature 699 713 IPR004358 GO:0016310|GO:0016772
Mepo5g01008 1200 PRINTS Bacterial sensor protein C-terminal signature 717 727 IPR004358 GO:0016310|GO:0016772
Mepo5g01008 1200 SMART REC_2 1050 1192 IPR001789 GO:0000160
Mepo5g01008 1200 Coils Coil 993 1013 - -
Mepo5g01008 1200 Gene3D - 497 576 - -
Mepo5g01008 1200 SMART HKATPase_4 622 774 IPR003594 -
Mepo5g01008 1200 MobiDBLite consensus disorder prediction 1 22 - -
Mepo5g01008 1200 Gene3D - 577 775 IPR036890 -
Mepo5g01008 1200 CDD REC_hyHK_CKI1_RcsC-like 1052 1192 - -
Mepo5g01008 1200 PANTHER TWO-COMPONENT HISTIDINE KINASE 63 780 - -
Mepo5g01008 1200 ProSiteProfiles Histidine kinase domain profile. 516 774 IPR005467 -
Mepo5g01008 1200 FunFam Histidine kinase 1-like protein 497 576 - -
Mepo5g01008 1200 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 622 772 IPR003594 -
Mepo5g01008 1200 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 497 576 IPR036097 GO:0000155|GO:0007165
Mepo5g01008 1200 MobiDBLite consensus disorder prediction 999 1020 - -
Mepo5g01008 1200 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 564 770 IPR036890 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Mepo5g01008 Mepo-Chr5 9945156 9951788 Dispersed/Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g01008 28 1199 Histidine Kinase Gene Family AT2G17820 65.497 0.0 1581
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Mepo5g01008 HATPase_c 4.2e-24 CL0025
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo5g01008 5 9945156 9951788 Mepo5g01008 5 9945156 9951788 ECH
Mepo5g01008 5 9945156 9951788 Mepo1g02152 1 22122942 22136798 PCT