Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g01159 ATGATAATAATCAAACCTAGAAATTCCAAACGCAAGCTTCAACACGATCCTTCACCGTTACACGTCATCAGCAAGAAGCTCCGGTCGAAGATTCCTCGCCGGAGACGACGTCAGATCTCGCCGGTGCTACTTGTTTCTCCGAGATTCAAAGCTTTTCGTGAGAATTGCGGTTTTTCTGTTGTTTCAGTTGATTCTAGTTCGAGTTCTGGTTCGGATTTCGCGGGAGGTGAAGTTTCGTGTGATTCGAGTAGAATCTCTGCTGTTAAAGGAAGAACGAACTCGAGAAGTGAAATTTCGAGTGGTGTTGAATGTGTTCGTAGATTTGAGAAGAGGAATGAGAATGAAGTTGAAGTTTCGGAGACTTCGTGTGTGGATTCGAGTTCTGGAGTTCGTAGAAACTTGATTTTGAAGTTCGAAAATGAAAAAGAGAACGATGAAGTTTCTGAAGTTTGTACGAAATCGGAACTTACTTTTGCTGAGATTTCAAAATCGAGTAACGGAAATTCGAATTTGAATTTGAATATCTCGTCGGAGATAACACGAAACGATGTCGTTTCTGTTAACAGAGCATCGGAATCTGAATTTTCTCAAATTTCGAGAAATCGTAATGCTGATGAGAATTGCGTTATCGCGCAATCGATTATGAAGAATTATACTGATAATTCAGGTTATGATTCCGATCTAGCTTGTTCTGAGAAACTGCAGTTCTCTTACTACGACGATGATGAATCGGAGGAGTATTGTTCAAGTCAGGGAACTACATTCTCCGATGTTCACTCGGAGATTTTCGGTGAAGGTTCAGATTATTCTCCATCGCAGTTCATTGATTCAGGTAGCGAGTTTTCTCAAGGATCCGTTGGTGAAACTCCTTCTCATACTTATTCGTTGCTTCTTCGATACCGCGACGAATTCGCGAAGCTAGGTTCTCCGGTTAAAGCTACTTCAATTGTTGAAGAAGATTTTTCTCTTCATAATAATTTTTCGAGGTTTGAAGACATGGATGATGAAGAGAGTTACCAGATGCTGAGAAAGAGAGAACGGAGGCAAGTTTTCATGTGGAATTATGGTGAAAAATATTTCTCTGCAACGGATTTTGCGGAAGTGTTTCAGCAACGTTCACGAATGGTTCATTGGATTGTTGAGCACTCTTATCGAAAACAGCTTCGACCAGAGACAATGTTTCTTGCAATCAATCTACTTGACCGTTTCCTGAGCAAGGGATACTTCAAAGCAGAAAGAAACCTTCATATTGTTGGAATAGCGTGTCTTACATTGGCAACCAGAATCGAAGAAAACCAGCAATATAACAGAGTGAACCAGAAAAATTTCTACATAGAAAAAAGTGTTTACAGTAGATGCGAAGTGGTGGCTATGGAATGGATGGTGCAGGAGGTGCTAGAGTTTGAGTGTTTTCATCCAACCATCTACAATTTCTTGTGTTTCTACCTTAAAGCTGCTAATGCTGATGCTACCGTGGAGAAAAGGGTTACGTGCCTTGCATTACTGGCTCTGTCAGGTCCTGATCAGCTGTGTTACTGGCCCTCAACTATTGCTGCTGCCATTGTAATCCTGGCTAGTCTAGAGCTCAATCAGAAAGCATCCCACAAAGTCATAGGGATCCACATTAGATCAAAGGAAGAGAATTTGCATGAATGCATGGAGAGCATGGAGTGGTTGTTACGCTATCTATGA 1692 0.4125 MIIIKPRNSKRKLQHDPSPLHVISKKLRSKIPRRRRRQISPVLLVSPRFKAFRENCGFSVVSVDSSSSSGSDFAGGEVSCDSSRISAVKGRTNSRSEISSGVECVRRFEKRNENEVEVSETSCVDSSSGVRRNLILKFENEKENDEVSEVCTKSELTFAEISKSSNGNSNLNLNISSEITRNDVVSVNRASESEFSQISRNRNADENCVIAQSIMKNYTDNSGYDSDLACSEKLQFSYYDDDESEEYCSSQGTTFSDVHSEIFGEGSDYSPSQFIDSGSEFSQGSVGETPSHTYSLLLRYRDEFAKLGSPVKATSIVEEDFSLHNNFSRFEDMDDEESYQMLRKRERRQVFMWNYGEKYFSATDFAEVFQQRSRMVHWIVEHSYRKQLRPETMFLAINLLDRFLSKGYFKAERNLHIVGIACLTLATRIEENQQYNRVNQKNFYIEKSVYSRCEVVAMEWMVQEVLEFECFHPTIYNFLCFYLKAANADATVEKRVTCLALLALSGPDQLCYWPSTIAAAIVILASLELNQKASHKVIGIHIRSKEENLHECMESMEWLLRYL 563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g01159 563 PIRSF Cyclin_A_B_D_E 335 561 IPR046965 GO:0016538|GO:0044772
Mepo4g01159 563 PIRSF Cyclin_A_B_D_E 67 253 IPR046965 GO:0016538|GO:0044772
Mepo4g01159 563 SUPERFAMILY Cyclin-like 332 469 IPR036915 -
Mepo4g01159 563 SUPERFAMILY Cyclin-like 473 560 IPR036915 -
Mepo4g01159 563 SMART cyclin_7 377 464 IPR013763 -
Mepo4g01159 563 ProSitePatterns Cyclins signature. 372 403 IPR006671 -
Mepo4g01159 563 Gene3D - 368 464 - -
Mepo4g01159 563 PANTHER CYCLINS 310 556 IPR039361 -
Mepo4g01159 563 Gene3D - 465 562 - -
Mepo4g01159 563 Pfam Cyclin, N-terminal domain 358 469 IPR006671 -
Mepo4g01159 563 Pfam Cyclin, C-terminal domain 473 558 IPR004367 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g01159 Mepo-Chr4 15154381 15158505 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g01159 370 534 Core Cell Cycle Gene Families AT3G11520 33.533 5.22e-19 87.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo4g01159 4 15154381 15158505 Mepo4g01159 4 15154381 15158505 ECH