Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g01135 ATGGATTCAAAGTCACTATGCTTCATAACCCACCAAGATATTTTCAATGTGGTTCGATCTGGTGATCTTGAAGGACTCAAAGAGGTGCTGAAACATGTTAACAGAGGTGAATCCTCAAATGGGCCATCATCATCAGTTTCTGAATTCTTGTCCATGCAGAATGATGCTGGAGAAACGTTATTGTATATAGCTGCAGAAAATGGTGTTGAGGATTTGTTCAGCTTCTTGTTAAGGTTATGTGATTTGGAGATACTCAAAATCCGGTCTAAATCTGATATGAATGCATTTCATGTTGCAGCTAAGCGTGGCCATTTGGAAATTGTGAGGGAAATTTTGAGTACTTGGCCTGAGGCTTGTAAGTTATGCGACTCCTCGAACACTAGTCCACTTTATTTAGCTGCTGTTCAAGACCATTTGGATGTGGTGAATGCTATTTTGGATGTTGACGTCAGTTCAATGATGATAGTAAGGAAAAACGGCAAAACGGCGTTGCACAATGCGGCTAGGTATGGCATTCTCCGCATCGTGAAAGCACTTATTGCAAGGGACTCAGCAATTGTTTGCATCAAAGATAAAAAGGGTCAAACAGCACTTCATATGGCTGTAAAAGGACAGTGTACTTCAGTAGTGGAGGAGATATTACAAGCTGACCCAATGGTATTAAACGAAAAAGATAAGAAGGGTAATACGGCTCTTCACATGGCTACTCGGAAAGCTCGTTCGCAGATAGTGAGCTTTTTGTTAAGCTATGCATCTATGAATGTCAATGCAATAAATAATCAGCAAGAAACAGCCTTGGATTTGGCAGATAAACTTCCGTACGGAGATTCATCTCTGGAAATCAAGGAAGCCCTTTCGGAATGTGGTGCCAAGAATGCCAGGAATATAGGCAAACTGAATGAAGCCATGGAACTTAAAAGAGTCGTGAGTGATATAAAGCACGAGGTGCAGTCACAACTCGTACAGAACGAAAAAACTCGCAAACGAGTTTCTGGTATAGCCAAGGAATTGAGGAAAATTCATAGGGAAGCAATCCAAAACACCATAAATTCTGTCACAGTAGTTGCTGTCCTTTTTGCATCAATAGCATTCATGGCTTTGTTCAGTTTGCCAGGTCAATATAGAAAGCAACAGCCAGAGGCAGGGAAGGCGAATATAGCTCACGAAGTTGCCTTCAGTGCTTTCTGTCTTTTGAATGCCACGTCTCTTTTCATTTCTCTCGCAGTTGTTGTTGTTCAAATCACTTTGGTAGCTTGGGACACAAGGGCTCAAAGACAGATTGTGTCGGTGATTAACAAGCTAATGTGGACGGCTTGTGCGTGCACTTGTGGAGCTTTTCTCGCAATAGCTTTTGTGGTTGTTGGAAAGGAAAGATGGATGGCTACTACTGTAACCGTTTTGGGAACACCGATTCTAGTTGGGACTCTAGCGTACTTGTGCTACTTTGTGTTCCGGCGACATTTTGGATTCCGAAGTGAATCCCAGAGAGTACTAGCTAAGAGACCAAGTGGAAGCAAATCATACTCCTGGTCTTACTCTGCACATATATCAGATGAGGAGGAATATAATTCTGATGTTGAGAAGATATACGCTCTTTGA 1599 0.4196 MDSKSLCFITHQDIFNVVRSGDLEGLKEVLKHVNRGESSNGPSSSVSEFLSMQNDAGETLLYIAAENGVEDLFSFLLRLCDLEILKIRSKSDMNAFHVAAKRGHLEIVREILSTWPEACKLCDSSNTSPLYLAAVQDHLDVVNAILDVDVSSMMIVRKNGKTALHNAARYGILRIVKALIARDSAIVCIKDKKGQTALHMAVKGQCTSVVEEILQADPMVLNEKDKKGNTALHMATRKARSQIVSFLLSYASMNVNAINNQQETALDLADKLPYGDSSLEIKEALSECGAKNARNIGKLNEAMELKRVVSDIKHEVQSQLVQNEKTRKRVSGIAKELRKIHREAIQNTINSVTVVAVLFASIAFMALFSLPGQYRKQQPEAGKANIAHEVAFSAFCLLNATSLFISLAVVVVQITLVAWDTRAQRQIVSVINKLMWTACACTCGAFLAIAFVVVGKERWMATTVTVLGTPILVGTLAYLCYFVFRRHFGFRSESQRVLAKRPSGSKSYSWSYSAHISDEEEYNSDVEKIYAL 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g01135 532 Pfam Domain of unknown function 343 452 IPR026961 -
Mepo4g01135 532 SUPERFAMILY Ankyrin repeat 14 272 IPR036770 -
Mepo4g01135 532 Gene3D - 150 333 IPR036770 -
Mepo4g01135 532 Gene3D - 6 149 IPR036770 -
Mepo4g01135 532 ProSiteProfiles Ankyrin repeat profile. 227 249 IPR002110 GO:0005515
Mepo4g01135 532 ProSiteProfiles Ankyrin repeat profile. 159 186 IPR002110 GO:0005515
Mepo4g01135 532 PANTHER PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT 17 511 - -
Mepo4g01135 532 Pfam Ankyrin repeats (3 copies) 191 256 IPR002110 GO:0005515
Mepo4g01135 532 Pfam Ankyrin repeats (3 copies) 61 147 IPR002110 GO:0005515
Mepo4g01135 532 ProSiteProfiles Ankyrin repeat region circular profile. 159 186 - -
Mepo4g01135 532 ProSiteProfiles Ankyrin repeat region circular profile. 227 249 - -
Mepo4g01135 532 SMART ANK_2a 193 223 IPR002110 GO:0005515
Mepo4g01135 532 SMART ANK_2a 125 155 IPR002110 GO:0005515
Mepo4g01135 532 SMART ANK_2a 91 120 IPR002110 GO:0005515
Mepo4g01135 532 SMART ANK_2a 159 188 IPR002110 GO:0005515
Mepo4g01135 532 SMART ANK_2a 56 84 IPR002110 GO:0005515
Mepo4g01135 532 SMART ANK_2a 227 257 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g01135 Mepo-Chr4 14854960 14858063 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g01135 1 532 Miscellaneous Gene Families AT2G01680 67.290 0.0 714
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo4g01135 4 14854960 14858063 Mepo4g01135 4 14854960 14858063 ECH