Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g01117 ATGGAAAGAGATTTCTTGAGTCTATGCTCAAAAGAATCATCACCTGAGATTAACAATGAAGAGTCAAAAAACTCAGGTTTTACAAATGTTTCAGCAGTAAAATGGCCCTTCTTGAACAAAGTCTCTGCTCATTCATATTTGATGCCTTTTAAAGTTTCTGAAGACGATAAGGCTAAAATGATATCTTCTGGTTTCATACAGAACTCTTTCAAACACGATGGACAAGGTGGCATTCATTTTTCTGTGAATCAGTATCCTGTACAACACAGTGTGAATTTTATGAATCGTCATCATGATGTGAAGATGTTTCCAGTTTCCAATCAAGCAAATTCACTTTCTGCGGTACATCCGCTCCTAAAAAATCATCTTGCAACTTTTGGTCAGAATATAAATGGTGCTAATGCGAAGCAATCACTACTTGGTGGATCGGTTACCGCACCTCATTCAGTTCTTCCGATCGTTGGTACTGTTGCTGGTTTGGTTGAACCATGTGACAAACCATCTGCACCTGCTCCTCAACTTACCATGTTTTATGGCGGTACTGTGAACATCTTCAATGATATCACTCCTGAGAAGGCACAAGCCATCATGTTGTTGGCTGGAAGTGGCTTATCTGCAGCTTCAAACAGGGCTCAACCTGAAGTTCAGGCATCTAGCTCGAAATTTGCATCAGGTGATGATGGTTTGCCTATAAGTTCAGCTGTAGACATACCACCCTGCTCTGGTATTTCAAGTCCTTTATCTGTTTCTTCACACACTGGTCCACAGCCAGGGAGTGGCTCAAGTAGCAGTGATGAGTTTATGGCTGCTAAAACATCTAGAGGCCCTACTCCTACCACATCTGCTTGCAAAGTTGTGACTCCCAAAGTAGTCAATGCAACCACCATGGTTCCATCAGCTATACCGCAGGCCCGCAAAGCATCATTGGCTCGATTTTTGGAGAAGCGCAAGGAAAGGGTGATGAGTACAGCACCGTATAACCTCAACAAGAAATCTGAGAATGCACAAATGCCGAATTCAATGGATGCTAACATCTCCGCGACCACTAGTACTGCTAATATGCCGGTAGCAAACCAAGGATAA 1083 0.4266 MERDFLSLCSKESSPEINNEESKNSGFTNVSAVKWPFLNKVSAHSYLMPFKVSEDDKAKMISSGFIQNSFKHDGQGGIHFSVNQYPVQHSVNFMNRHHDVKMFPVSNQANSLSAVHPLLKNHLATFGQNINGANAKQSLLGGSVTAPHSVLPIVGTVAGLVEPCDKPSAPAPQLTMFYGGTVNIFNDITPEKAQAIMLLAGSGLSAASNRAQPEVQASSSKFASGDDGLPISSAVDIPPCSGISSPLSVSSHTGPQPGSGSSSSDEFMAAKTSRGPTPTTSACKVVTPKVVNATTMVPSAIPQARKASLARFLEKRKERVMSTAPYNLNKKSENAQMPNSMDANISATTSTANMPVANQG 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g01117 360 Pfam tify domain 170 201 IPR010399 -
Mepo4g01117 360 Pfam Jas motif 302 326 IPR018467 -
Mepo4g01117 360 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 101 335 IPR040390 -
Mepo4g01117 360 MobiDBLite consensus disorder prediction 330 360 - -
Mepo4g01117 360 MobiDBLite consensus disorder prediction 244 282 - -
Mepo4g01117 360 ProSiteProfiles Tify domain profile. 167 202 IPR010399 -
Mepo4g01117 360 SMART tify_2 167 202 IPR010399 -
Mepo4g01117 360 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g01117 Mepo-Chr4 14728506 14732498 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g01117 33 332 Tify Gene Family AT3G17860 36.760 1.13e-33 125
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Mepo4g01117 tify 9.5e-16 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo4g01117 4 14728506 14732498 Mepo4g01117 4 14728506 14732498 ECH