Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g05021 ATGGTGAAAGCAGCATCGGCGAGCGAGAAGGGTGGTTCGGTGGCACCTTTTTTGAAGAAATGTTACGATATGGTTGAAGATCCTTCTACCGACTCCATCATCTCATGGTCCGCTGATTGTAACAATAGTTTCATCATCTCCAACTCTGATCAATTCTCACTCACTCTTCTCCCCAATTATTTCAAACACAATAATTTCTCAAGCTTCGTCAGACAACTCAATATCTATGGTTTCAGGAAAATTGATGCAGATCACTGGGAATTCGCCAATGAAAACTTCATTAGGGGTCAAAAGCATTTGCTGAAGAATATACGGAGAAGGAAACATCCACATGTTGCTGCAGATCAGCAAAAAGCATTGCCTCCAAAAGACAATTGTGATGAACCATCACAAGAAGCAGTAAATCACGGCCTTTGGATAGAAGTGGAGAATCTAAAATCGGATAGAAAAACCCTCACGCAGGAGTTGGTCAAACATAAGCAGCACCTTGAATCTTCTGAGAGTAAGCTGCTTCTACTGAGTGATCGCCTTGAAGGAATGGAGAAGCATCAACAGCAGATGCTCTCATTCTTGGTCATGGTCGTGCAATGCCCTGGATTCTTGGTTCAGCTGCTTCACCCTAAGGAAAATAACTGGCGTTTCTCTGAAGCAGGGAATATGTGGGACCAAGGTAACCAAGATGACAGACCAGTTTCTTCTGATGGGATGATTATAAAGTATACACCACCTGTTGCTGAAAAACTAAAACCCGTTGTTCCACGATCTCCTGCCTTTAATAAGCAACCAGAACCTGAGGTTTCTACAGATGGGTTAAAAGACCTGTGCATCAGTTCTGAGTTCTTGAAACTGCTTCTTGATGAGAAATTGTGTCCATTAGATAATCATTCTCCATTTCTTGTACCTGATTTACCGGACGACGGTTCGTGGGAACAACTATTTTTAGGCAGTTCTATCCTAAAAAATGTTGAAGATACTGATCGTGAAAACGAGGAGCAAACTGTTAGTGACACGGAGATGGATCACATCATATCTGAAGCTCTAAATGAAACATCTGATTTTGAAGCAATGATTATGGAAATGGAGAACACTCACGCATGA 1098 0.418 MVKAASASEKGGSVAPFLKKCYDMVEDPSTDSIISWSADCNNSFIISNSDQFSLTLLPNYFKHNNFSSFVRQLNIYGFRKIDADHWEFANENFIRGQKHLLKNIRRRKHPHVAADQQKALPPKDNCDEPSQEAVNHGLWIEVENLKSDRKTLTQELVKHKQHLESSESKLLLLSDRLEGMEKHQQQMLSFLVMVVQCPGFLVQLLHPKENNWRFSEAGNMWDQGNQDDRPVSSDGMIIKYTPPVAEKLKPVVPRSPAFNKQPEPEVSTDGLKDLCISSEFLKLLLDEKLCPLDNHSPFLVPDLPDDGSWEQLFLGSSILKNVEDTDRENEEQTVSDTEMDHIISEALNETSDFEAMIMEMENTHA 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g05021 365 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 9 228 IPR027725 -
Mepo2g05021 365 PRINTS Heat shock factor (HSF) domain signature 69 81 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mepo2g05021 365 PRINTS Heat shock factor (HSF) domain signature 17 40 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mepo2g05021 365 PRINTS Heat shock factor (HSF) domain signature 56 68 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mepo2g05021 365 FunFam Heat shock transcription factor 1 10 108 - -
Mepo2g05021 365 Gene3D - 9 108 IPR036388 -
Mepo2g05021 365 Coils Coil 142 169 - -
Mepo2g05021 365 SUPERFAMILY "Winged helix" DNA-binding domain 13 107 IPR036390 -
Mepo2g05021 365 Pfam HSF-type DNA-binding 17 107 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mepo2g05021 365 SMART hsfneu3 13 107 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mepo2g05021 365 ProSitePatterns HSF-type DNA-binding domain signature. 57 81 IPR000232 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g05021 Mepo-Chr2 58190153 58192681 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g05021 14 316 HSF AT1G67970 46.711 3.00e-89 271
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Mepo2g05021 HSF_DNA-bind 3e-31 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo2g05021 2 58190153 58192681 Mepo2g05021 2 58190153 58192681 ECH