Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g05013 ATGGCTATGGCAAGAGATAAAAAAGAAGATGAAGAAGAGGTTCATAATCAAAATCAAAAAGGTGGGAAGAGATTGAAATGCATGAACTTGATGAAGAATGAACAAGAAGAAAAGCAAGTAGTAGATGAAGAAGAAAGTGAGCTTCCATTAAAACCAGAACTTTTCTTCTACCCAACAACACCAACATCTTTTGTTGTATCAGATGCACTTGAATCAGATTTTCCAATCATTTATGTCAACAAAGTCTTTGAAATCTCAACTGGGTATCGTGCTCATGAAGCCCTTGGTCGTAACTGCCGGTTCTTACAATATAGGGATCCTAGGGCTCAGAGGCGGCATCCTTTGGTGGATCCAGTCGTTGTGTCTGAGATTAGAAGATGTCTTGAAGAAGGTATTGAGTTCCAAGGCGAACTTCTAAATTTCAGAAAGGATGGTACTCCCTTAGTCAACAGACTCAGGCTTACGCCAATTCATGATGATGATGGAGTCGTGACACACATAATAGGTATCCAAATCTTTTCCGAGGCAAACATAGACTTGAACAGCGTTTCCTATCCAGTTTTCAGAGAGACTTGCATTCAAGATTTTGATAAAAATGCTAAATATTCTCCCAAAAGTGGAAAATTATTGTACACTCCGCAGCAGCGCGAAGAGATGTGTGGCATTCTTCAGCTTTCTGATGAAGTCTTGGCGCACAACATATTGTCACGCTTGACACCGAGGGATGTTGCATCGATCGGTTCTGTTTGCAGGAGGATCCGTCAATTAACAAAGAACGAGCACGTTAGGAAGATGGTTTGTCAAAATGCATGGGGCAAAGAAGTGACCGGTACATTGGAATTGATGACCAAGAAGTTAGGTTGGGGTCGTCTGACTCGGGAGCTTACTACTCTTGAGGCTGTTTGCTGGAAAAAAGTTACAGTTGGAGGCGGGGTTGAGCCTTCACGCTGCAATTTCAGTGCTTGTGCTGCAGGAAATAGGCTTGTATTATTTGGAGGTGAAGGAGTGGATATGCAGCCTATGGATGATACTTTTGTTTTAAATCTTGATGCTAAGAATCCAGAATGGCAAAGGGTTAGTGTGATATCATCCCCGCCCGGCCGATGGGGCCACACACTCTCTTGCTTAAACAGTTCTTGGCTAGTTGTTTTTGGTGGATGTGGTAGGCAAGGATTGCTTAATGATGTGTTTGTGCTTGATTTGGATGCTCAACAGCCAACATGGAAGGAAGTCTTCGGTGAAGCACCGCCTCTTCCGAGATCTTGGCACAGCTCGTGCACAATTGAAGGCTCTAAATTGGTTGTCTCTGGCGGCTGCACAGATGCTGGAGTACTTCTTAGTGACACATATTTACTTGACCTCACAATAGATAATCCTACATGGAGAGAAATTCCAACTTCATGGACTCCTCCTTCTAGATTAGGGCACTCACTCTCAGTTTATGGTAGGACAAAGATTCTCATGTTTGGTGGACTTGCAAAGAGTGGACACTTAAGGTTAAGATCAGGTGAGGCTTATACAATTGATTTAGAAGCTGAACAACCACAATGGAGGCAACTAGAATGTAGTGCATTCACAGGTTTATCAAATCAAAATGCTGTTGTACCTCCTCCTAGACTAGATCATGTTGCAGTAAGCATGCCTTGTGGGAGGGTTATTATATTTGGAGGTTCCATTGCAGGTCTTCATTCACCGTCTCAGCTATTTCTATTGGACCCTGCCGAAGAGAAACCGACGTGGAGGATCCTCAATGTTCCGGGGGAACCACCTAAATTTGCTTGGGGTCATAGCACTTGTGTGGTTGGAGGGACTAGGGTTTTGGTGTTGGGTGGACATACCGGGGAGGAATGGGTACTAAATGAGTTGCATGAGTTATGCTTGGCAAGTCGACAAGACTCTGACATGTGA 1908 0.4366 MAMARDKKEDEEEVHNQNQKGGKRLKCMNLMKNEQEEKQVVDEEESELPLKPELFFYPTTPTSFVVSDALESDFPIIYVNKVFEISTGYRAHEALGRNCRFLQYRDPRAQRRHPLVDPVVVSEIRRCLEEGIEFQGELLNFRKDGTPLVNRLRLTPIHDDDGVVTHIIGIQIFSEANIDLNSVSYPVFRETCIQDFDKNAKYSPKSGKLLYTPQQREEMCGILQLSDEVLAHNILSRLTPRDVASIGSVCRRIRQLTKNEHVRKMVCQNAWGKEVTGTLELMTKKLGWGRLTRELTTLEAVCWKKVTVGGGVEPSRCNFSACAAGNRLVLFGGEGVDMQPMDDTFVLNLDAKNPEWQRVSVISSPPGRWGHTLSCLNSSWLVVFGGCGRQGLLNDVFVLDLDAQQPTWKEVFGEAPPLPRSWHSSCTIEGSKLVVSGGCTDAGVLLSDTYLLDLTIDNPTWREIPTSWTPPSRLGHSLSVYGRTKILMFGGLAKSGHLRLRSGEAYTIDLEAEQPQWRQLECSAFTGLSNQNAVVPPPRLDHVAVSMPCGRVIIFGGSIAGLHSPSQLFLLDPAEEKPTWRILNVPGEPPKFAWGHSTCVVGGTRVLVLGGHTGEEWVLNELHELCLASRQDSDM 635
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g05013 635 CDD PAS 60 170 IPR000014 -
Mepo2g05013 635 MobiDBLite consensus disorder prediction 1 20 - -
Mepo2g05013 635 Pfam Galactose oxidase, central domain 381 428 - -
Mepo2g05013 635 Pfam Galactose oxidase, central domain 430 481 - -
Mepo2g05013 635 Gene3D - 497 630 IPR015915 GO:0005515
Mepo2g05013 635 PANTHER BACTERIOOPSIN TRANSCRIPTIONAL ACTIVATOR 39 629 - -
Mepo2g05013 635 SUPERFAMILY F-box domain 215 274 IPR036047 GO:0005515
Mepo2g05013 635 CDD F-box_AtADO-like 221 267 - -
Mepo2g05013 635 SUPERFAMILY Galactose oxidase, central domain 303 620 IPR011043 -
Mepo2g05013 635 SMART pac_2 135 176 IPR001610 -
Mepo2g05013 635 Gene3D - 215 266 - -
Mepo2g05013 635 MobiDBLite consensus disorder prediction 1 26 - -
Mepo2g05013 635 Pfam PAS domain 70 171 IPR000014 -
Mepo2g05013 635 Gene3D PAS domain 57 182 - -
Mepo2g05013 635 FunFam Putative LOV domain-containing protein 293 498 - -
Mepo2g05013 635 FunFam Adagio protein 1 52 182 - -
Mepo2g05013 635 NCBIfam PAS domain S-box protein 73 170 IPR000014 -
Mepo2g05013 635 FunFam Putative LOV domain-containing protein 499 631 - -
Mepo2g05013 635 Pfam F-box domain 222 259 IPR001810 GO:0005515
Mepo2g05013 635 Pfam Kelch motif 540 587 IPR011498 GO:0005515
Mepo2g05013 635 Pfam Galactose oxidase, central domain 316 366 - -
Mepo2g05013 635 Gene3D - 294 496 IPR015915 GO:0005515
Mepo2g05013 635 SUPERFAMILY PYP-like sensor domain (PAS domain) 64 171 IPR035965 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g05013 Mepo-Chr2 58113046 58116098 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g05013 63 172 AGC Kinase Gene Family AT5G58140 44.545 4.89e-21 96.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo2g05013 2 58113046 58116098 Mepo2g05013 2 58113046 58116098 ECH