Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g05007 ATGTCAACACCCAACTACGCCCACGCGCCACTCCTTCGCCCCCGCCGCGTGGGCCGCACGCCCGTCCTCGCCCTCCTTCTTGGCCGCCGCGGTCCTTCCGTCTTAGTCCGCGAAACAGCGGCGCGTGAGCTTGAGGAACGCCGCGCCGATTGGGGCTACTCTAAGCCGGTGGTATTACTCGACGTGACGTGGAACACGGTCTTTGTGGCGGTTGCAGCGGTTATGTTAGGTTGCAGTGTTGATGAGAATCCAAATACGCCGATCCGGTTGTGGATCTTTGGCTACGCGGTGCAGTGTTTGGTACATGTGGCGTTGGTGTTATTAGAGTATAGGAGGAGGAACGGGATTGGTGGTGGAAGGGAAAGGGATGAAGAATCTCTTGATGATGCTAATGATAGCGAGGATGATGATGTTGAATTTCTGAATTCTTCTAGCTACGGATTTGCAAAACGATGTTCATCTCTGAATACCATGCTTTCATTGCTCTGGTGGATGGTGGGATTTTACTGGGTTGTCAATGGTGGTGATATTCTAATTCAAGATGCTCCACGGTTGTACTGGTTGGCTGTTGTCTTTCTAGCATTTGATGTCTTCTTTGCTGTCTTTTGTGTTGCTTTGGCATGCTTAATTGGCATTGCCCTCTGCTGCTGTTTACCATGTATTATTGGTATTCTCTATGCCGTTGCGGGACAGGAGGGTGCATCTGAATCAGATCTCAGTACACTTCCAAAATACAGGTTTCAAGTGCTAGGCAATGAGGAAACACCTAGTCCAAGGGGTGGATCAATGGTTCCAATTGAAAATAGTAGTGGTGCAAATGAACGAGTACTTTCACCTGAAGACGCGGAATGTTGTATATGCATCTCTCCCTACGAGGATGAAGCAGAACTTCATGCTCTTCCTTGTAACCACCATTTCCATTCCACATGCATAGTGAAATGGTTAAGGATGAATGCAACTTGTCCTCTTTGCAAGTTCAATATTCTAAAGGGAAATGAACAGGTGTGA 1008 0.4821 MSTPNYAHAPLLRPRRVGRTPVLALLLGRRGPSVLVRETAARELEERRADWGYSKPVVLLDVTWNTVFVAVAAVMLGCSVDENPNTPIRLWIFGYAVQCLVHVALVLLEYRRRNGIGGGRERDEESLDDANDSEDDDVEFLNSSSYGFAKRCSSLNTMLSLLWWMVGFYWVVNGGDILIQDAPRLYWLAVVFLAFDVFFAVFCVALACLIGIALCCCLPCIIGILYAVAGQEGASESDLSTLPKYRFQVLGNEETPSPRGGSMVPIENSSGANERVLSPEDAECCICISPYEDEAELHALPCNHHFHSTCIVKWLRMNATCPLCKFNILKGNEQV 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g05007 335 SMART ring_2 284 324 IPR001841 -
Mepo2g05007 335 CDD RING-H2_PA-TM-RING 283 325 - -
Mepo2g05007 335 FunFam E3 ubiquitin protein ligase RIE1 264 332 - -
Mepo2g05007 335 ProSiteProfiles Zinc finger RING-type profile. 284 325 IPR001841 -
Mepo2g05007 335 Pfam Ring finger domain 283 325 IPR001841 -
Mepo2g05007 335 SUPERFAMILY RING/U-box 274 329 - -
Mepo2g05007 335 PANTHER TARGET OF ERK KINASE MPK-1 28 333 - -
Mepo2g05007 335 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 265 333 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g05007 Mepo-Chr2 58063204 58067638 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g05007 1 334 C3H Transcription Factor Family AT1G68070 64.655 8.18e-159 446
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo2g05007 2 58063204 58067638 Mepo2g05007 2 58063204 58067638 ECH