Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g03829 ATGGTACACAACAGGTCTCTTCTGTCTAACAACATGGATAATGCTTGCTTTCCTTCTCCACACATTGATGCTTTTCCAGCTGGTCTGCGAGTTATCGTTGTTGATGATGATCAAACTTGGCTTAGAATCCTTGAAAAAATGCTCAAAAAATGCTTTTACCGAGTGACCACATGTTGCTTAGCAATAGAGGCTCTTAAGAAGCTCCGCGAAAGTAAAGGTACATATGACATAGTGATCAGCGATGTAAACATGCCTGACATGGATGGTTTCAAGCTTCTTGAACATGTTGGACTTGAGATGGATCTTCCTGTCATTATGATGTCTGTTGATGGAGAAACAAACAGGGTGATGAAAGGTGTTCAACATGGAGCATGTGATTATTTGCTTAAGCCTATAAGGATGAAAGAATTGCGAAACATATGGCGACATGTCTTAAGAAAAAGAATACACGAGGCAAGACAGTTTGAAAGTGTTGAGGGAATTCACTTAATGAGAAATGGATCAGATCACACTGATGATGGTAACCTGTTTGCTGTAGGAGAAGAAATGAACTTAATGAAGAAAAGGAAAAATTTCGATAGTAAACATGATGACCAAGAACTCATAGATCGAACTTTCATAAAGAAAGCTAGAGTTCTTTGGTCTGTGGATCTTCATCAGAAGTTTGTTAAAGCCGTGAATCAACTTGGATTCGATAAAGTTGGTCCCAAGAAAATTCTGGAATTGATGAATGTTCCGTGGCTGACTAGAGAAAATGTTGCTAGTCACTTGCAGAAATACCGGCTCTACTTGCGTAGGTTGCAAAAGAAAAATTATCAGAAATCGCCCTCAGGTGGAATAAAGCATTCAGATTTACCTTCAAAAGATCCAGGATGTTTAAGCTTTCTCAACTCTTTCAACAAGCAACAAAACGAAGGTGCAATCGACAGCTTCGGATATTCAGACGGGACATCAAAAATTAAAATGGATACTACAAGTCATGAAAAAAGAAGAGCTTCAACTAGTAACATTTCTGATCCAAAGATAAGAAAAAGTATAGAGATAGGTCTTAACCAATCTCTTGAATCTGCAGAGTCAGAAGCAAACCATACAGTATTTGATTCCACCATTCCAAGACAGTACTCTTGGAATGAAGTTCCAAAAAGGCCACTCAAAGAAGAACTTAACACACTTGTACAATTAAAGGATAATCTCAGTCATTTGCCATTAAATGTTAGACAACAACACTTCCAAATTGACCAATCACTATCAACTAATTCCAATCCCTCCGATTACAAGAGCGATTACATTAGTCCTGTGAATTCAATGGCGTCTTCACTTGATACCTTTCCTAGTCGGTGCAAAAGCCTCATGTCGAATGATCAATCTCCTGATATCATTTTAACTTCAAATTTGAGTTCAAAAACACCAAGATTTAATCTTGGTTGCATTTCTGATATGGAAATCTACCAAAGAAACTTGATTTTGGGTATTGAGTCAGCTTCAACACCTTTGGATGAGGACTTAAATTTCCTTTTGTTACAAGGTGAATACTATGATATGAACTTTGACATGCAGAATATAGAGATGTCAGAGTATTATGATCCAAGGCTTAATACTGAAGTTCCTATCAATTTGTATGCTTCACCAGATTATTCTTAG 1641 0.3729 MVHNRSLLSNNMDNACFPSPHIDAFPAGLRVIVVDDDQTWLRILEKMLKKCFYRVTTCCLAIEALKKLRESKGTYDIVISDVNMPDMDGFKLLEHVGLEMDLPVIMMSVDGETNRVMKGVQHGACDYLLKPIRMKELRNIWRHVLRKRIHEARQFESVEGIHLMRNGSDHTDDGNLFAVGEEMNLMKKRKNFDSKHDDQELIDRTFIKKARVLWSVDLHQKFVKAVNQLGFDKVGPKKILELMNVPWLTRENVASHLQKYRLYLRRLQKKNYQKSPSGGIKHSDLPSKDPGCLSFLNSFNKQQNEGAIDSFGYSDGTSKIKMDTTSHEKRRASTSNISDPKIRKSIEIGLNQSLESAESEANHTVFDSTIPRQYSWNEVPKRPLKEELNTLVQLKDNLSHLPLNVRQQHFQIDQSLSTNSNPSDYKSDYISPVNSMASSLDTFPSRCKSLMSNDQSPDIILTSNLSSKTPRFNLGCISDMEIYQRNLILGIESASTPLDEDLNFLLLQGEYYDMNFDMQNIEMSEYYDPRLNTEVPINLYASPDYS 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g03829 546 PIRSF RR_ARR_type-B 8 525 IPR017053 GO:0003677|GO:0003700|GO:0009736
Mepo2g03829 546 MobiDBLite consensus disorder prediction 319 340 - -
Mepo2g03829 546 SUPERFAMILY Homeodomain-like 207 266 IPR009057 -
Mepo2g03829 546 ProSiteProfiles Response regulatory domain profile. 30 145 IPR001789 GO:0000160
Mepo2g03829 546 SUPERFAMILY CheY-like 28 158 IPR011006 -
Mepo2g03829 546 FunFam Two-component response regulator 206 268 - -
Mepo2g03829 546 CDD REC_typeB_ARR-like 31 145 - -
Mepo2g03829 546 PANTHER TWO-COMPONENT RESPONSE REGULATOR 29 336 IPR045279 GO:0009736
Mepo2g03829 546 Pfam Response regulator receiver domain 31 140 IPR001789 GO:0000160
Mepo2g03829 546 SMART REC_2 29 141 IPR001789 GO:0000160
Mepo2g03829 546 Gene3D - 29 197 - -
Mepo2g03829 546 Gene3D - 206 268 - -
Mepo2g03829 546 MobiDBLite consensus disorder prediction 321 337 - -
Mepo2g03829 546 Pfam Myb-like DNA-binding domain 213 261 IPR001005 -
Mepo2g03829 546 NCBIfam myb-like DNA-binding domain, SHAQKYF class 209 262 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g03829 Mepo-Chr2 47533438 47536484 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g03829 22 275 Response Regulator Gene Family AT2G25180 53.668 9.27e-81 262
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-ARR-B Mepo2g03829 Response_reg 6.9e-23 CL0304
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo2g03829 2 47533438 47536484 Mepo2g03829 2 47533438 47536484 ECH
Mepo3g06257 3 76699526 76703263 Mepo2g03829 2 47533438 47536484 PCT