Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g03256 ATGGAGACAAGAAGGACAGAGGGAAAAAGAAGTTTGAAGTACAAAGAGGATCGTGAGGAGGAAGAAGAGGAAGAGGATACGGATTTTGAAGAGGAAGAGGATGGTAGAAGGAAGAGGGTAGTGACAGATCTCTATAGCAAGAGAAGTTCCAAAAAAGCTGGAAGCTCAAATATTCCACCTTGTTGTCAAGTGGAGAATTGTGATGCTGATCTTAGTGAAGCTAAGCAATATCACCGGAGACATAAGGTTTGTGAGTATCATGCCAAAGCACCTGCCGTACACATTGCAGGGTTGCAGCAAAGGTTTTGTCAGCAATGTAGCAGATTCCATGGACTATCTGAATTTGATGACTCAAAAAGAAGTTGCAGAAGGCGTTTGGCTGGGCATAATGAGAGGCGTCGCAAAAGTGCAATTGACTATCAAGGAGAATGA 432 0.4329 METRRTEGKRSLKYKEDREEEEEEEDTDFEEEEDGRRKRVVTDLYSKRSSKKAGSSNIPPCCQVENCDADLSEAKQYHRRHKVCEYHAKAPAVHIAGLQQRFCQQCSRFHGLSEFDDSKRSCRRRLAGHNERRRKSAIDYQGE 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g03256 143 MobiDBLite consensus disorder prediction 1 58 - -
Mepo2g03256 143 PIRSF SBP 1 143 IPR017238 GO:0003677|GO:0003700|GO:0009908
Mepo2g03256 143 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 42 136 IPR044817 GO:0003677
Mepo2g03256 143 MobiDBLite consensus disorder prediction 1 17 - -
Mepo2g03256 143 Gene3D - 52 123 IPR036893 GO:0003677|GO:0005634
Mepo2g03256 143 FunFam Squamosa promoter-binding-like protein 14 52 123 - -
Mepo2g03256 143 Pfam SBP domain 62 135 IPR004333 GO:0003677
Mepo2g03256 143 MobiDBLite consensus disorder prediction 32 46 - -
Mepo2g03256 143 ProSiteProfiles Zinc finger SBP-type profile. 59 136 IPR004333 GO:0003677
Mepo2g03256 143 SUPERFAMILY SBT domain 59 140 IPR036893 GO:0003677|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g03256 Mepo-Chr2 42190407 42195478 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g03256 44 139 SBP-box Gene Family AT2G33810 69.792 1.48e-44 140
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Mepo2g03256 SBP 1.2e-33 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo2g03256 2 42190407 42195478 Mepo6g00459 6 4711318 4713962 PCT