Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g4076 ATGATCACTTTCTCCTCCTTGTTCTTGTTTTTCTTCTTGACAACTTTTCCAACAACAATTTGCCAACATCATAACAAACATGAAGAGTGTACCAAACAATACACATGTGGTGAAGTATCCAACATATACTATCCATTTTGGGGACAAAACATACCAAGTTATTGTGGTAGCAACAATCAATTCCACCTCAAATGTGATCCTCATCATCAAAACACAACTATTCAAATTGATTCACAAAATTTCCATGTCTTACGTATTGATCAATTGGGTTACACCATGTCAATGTTTCGAAAAGACCTTGTTTATGATCATTGCTCTTCTGCTTTAACCAACAATTCTTTAAACTTGAGTTTCTTTCATTACATGCCTAATGTGAGGAACATCACTATCTTATATAACTGTCCTAATGACATCAAGCTTCCAAATGGCACGAACATGAAAGCGAACTCATTTCCGTGCCATGAAGATGAGAACAAACGCGCTTTCTTTGTGGATTCTGCAACAGCAGAGGGTTTAAAATGTGAGGGACTTCGTATTGAAGTTCAGGTAAGACAGGGAGTGGAGCTTGGTGGTGGAATTGAAGGGTTGAACAAAGCTTTGAGTGGTGGATTTGATGTGAGATATGTTTTTGATACTCAAGCATGCTTAAAATGTATTTTAAGTAATGGAACTTGTGGGGGAAATGATAAGAATCAATTTTCATGTTATTGTCCTGATGGAACTGAAGGTTTAGATTGTTCTCATCGCCACGATAATCGATGGAATTCGAAAACTAAGGTTGCTGTAGGAGTTTCTGCTGCTGTGATCAGTGCAATTGCAGTAGGTATTGGCTTCTACATCTATTATTATTGCAGAAAGAAGAAAAAGAATGTTCATGGAGTATTAGCTGAACTATCTCTATCTCAGACTCAGAGTATCTCTGGTTCTTGTTCAGAAGATACTGAGAAGGGAAGTAGATACCATGGAGTCCACTTCTTCACTTATAGTGAACTTGAAAAGGCCACAAACTACTTTGATTCTACTAGAGCACTAGGAGATGGAGGCTTTGGCACAGTGTATTTTGGAACACTTCGAGACGGGCGTCTGGTTGCGGTCAAACGCATGAACGAAAACAACTACAGGAGAGTTGAGCAATTTGTGAATGAAGTTGAGATCTTAACTGGCTTACACCATCAAAATCTTGTGTCACTATATGGATGCACTTCGCGCCAGAGTCGCGAACTTCTGCTTGTATATGAATATGTTCCTAATGGAACAGTTGCGGATCACCTTCATGGTCAAAAAGCAAAACCTGGCATGCTACCTTGGCATGTCAGAATGAATATTGCCATAGAAACTGCTAGTGCATTAGTTTATCTCCATGCCACGGACATCATCCATAGAGATGTGAAAACCAACAACATTCTCCTTGACAATCATTTTAGTGTCAAAGTAGCAGATTTTGGACTTTCGCGTCTATTTCCATATCACGTCACACACATTTCGACTGCTCCACAAGGGACTCCTGGTTATGTGGATCCAGAATACCATTTGTACTATCAGCTTACTGATAAAAGCGATGTATTTAGCTTCGGAGTTGTGCTGATTGAGTTAATATCATCTAAGCCTGCTGTTGATATCTCAAGGCATAGGCAAGAAATCAATTTGTCCAACATGGCCATTAAGAAGATTCAAAATGGGACATTGCATGAACTTGTTGACCCTACACTTGGTTTTGAATCAGATTTCAAGGTAAGGAAAATGATTAATGCGGCCGCAGAGTTAGCATTTCAGTGTTTGCAGAGTTCTAAAGATGCGAGACCTTCTATGGTAGAAGTGTTGGAAAGGCTTAAGGATATTCAAAGTGATGGGATATATAAATGTAAACCTGAGGTGTTGGATATCTCAGGAGATGATGATACCACTTTGATACAAAGTGAACCACCACCATCATCACCAGATTCAAATTTATTAAGCTTATCTACTCCATCATATACTAATACTGATATAAGATTGAGGTGTACATAA 2007 0.3871 MITFSSLFLFFFLTTFPTTICQHHNKHEECTKQYTCGEVSNIYYPFWGQNIPSYCGSNNQFHLKCDPHHQNTTIQIDSQNFHVLRIDQLGYTMSMFRKDLVYDHCSSALTNNSLNLSFFHYMPNVRNITILYNCPNDIKLPNGTNMKANSFPCHEDENKRAFFVDSATAEGLKCEGLRIEVQVRQGVELGGGIEGLNKALSGGFDVRYVFDTQACLKCILSNGTCGGNDKNQFSCYCPDGTEGLDCSHRHDNRWNSKTKVAVGVSAAVISAIAVGIGFYIYYYCRKKKKNVHGVLAELSLSQTQSISGSCSEDTEKGSRYHGVHFFTYSELEKATNYFDSTRALGDGGFGTVYFGTLRDGRLVAVKRMNENNYRRVEQFVNEVEILTGLHHQNLVSLYGCTSRQSRELLLVYEYVPNGTVADHLHGQKAKPGMLPWHVRMNIAIETASALVYLHATDIIHRDVKTNNILLDNHFSVKVADFGLSRLFPYHVTHISTAPQGTPGYVDPEYHLYYQLTDKSDVFSFGVVLIELISSKPAVDISRHRQEINLSNMAIKKIQNGTLHELVDPTLGFESDFKVRKMINAAAELAFQCLQSSKDARPSMVEVLERLKDIQSDGIYKCKPEVLDISGDDDTTLIQSEPPPSSPDSNLLSLSTPSYTNTDIRLRCT* 669
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g4076 668 SMART serkin_6 338 619 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal7g4076 668 ProSitePatterns Serine/Threonine protein kinases active-site signature. 458 470 IPR008271 GO:0004672|GO:0006468
Mal7g4076 668 Pfam Wall-associated receptor kinase galacturonan-binding 30 95 IPR025287 GO:0030247
Mal7g4076 668 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 4 650 IPR044652 -
Mal7g4076 668 Gene3D Transferase(Phosphotransferase) domain 1 415 621 - -
Mal7g4076 668 ProSitePatterns Protein kinases ATP-binding region signature. 344 366 IPR017441 GO:0005524
Mal7g4076 668 ProSiteProfiles Protein kinase domain profile. 338 613 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal7g4076 668 ProSitePatterns EGF-like domain signature 1. 235 246 IPR000742 -
Mal7g4076 668 MobiDBLite consensus disorder prediction 632 656 - -
Mal7g4076 668 Pfam Protein kinase domain 340 608 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal7g4076 668 Gene3D Phosphorylase Kinase; domain 1 309 414 - -
Mal7g4076 668 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.2 4 650 - -
Mal7g4076 668 SUPERFAMILY Protein kinase-like (PK-like) 320 637 IPR011009 -
Mal7g4076 668 Pfam Wall-associated receptor kinase C-terminal 173 240 IPR032872 -
Mal7g4076 668 CDD STKc_IRAK 344 613 - -
Mal7g4076 668 MobiDBLite consensus disorder prediction 630 656 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g4076 Mal-Chr7 107321489 107324454 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g4076 32 616 Receptor kinase-like Gene Family AT1G25390 44.182 8.50e-147 439
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Mal7g4076 Pkinase 3.2e-48 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal7g4076 7 107321489 107324454 Mal7g4076 7 107321489 107324454 ECH