Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g4075 ATGATGACTCCAAACTTGAACTTGGAACCGGAAAATCAGTCAGAATCACCTCATGATCTAGATTCTATGACCCTTGACTTGACACTCAATTTCAGTTCGAGTGAAGGCGAGTTAATGGGTTCAAGCGATGCAAGCAGTGAAGTAGGAGCTGCCGAAGCTCACGCTTCACCATCGGTAACTCCAAGGGTATTCTCTTGTAATTACTGCAAGAGGAAGTTCTATAGCTCGCAAGCGTTAGGGGGTCATCAGAATGCTCACAAAAGGGAGAGGACGATGGCTAAACGAGCAATGCGGATGGGAATGTTCACCGAGAGGTATACAAGCCTAGCATCTCTACCTCTTCATGGTTCGCCTTTTCGGTCCCTCGGTGTTGAAGCTCATTCTGCAATGCATCAAAGAAGAGAAATGCAACCATCATCATCGATGAGGGCTCCAGATATGAGAGCTGCTGCGAAATTTGATAGAAACCATTTTGGATCACTAGTTTTCGTGGAAGATGATGATGTAGGTTGCTTTTGGCCCGGAAGTTTTAGACAGGTGAACCAAGGAAGAGGTGTTAATATAGGATATCCTCCTCAAACTTCAAATTCTAGTTTTGTTCCAATGGCACCTCCTCCACCACAAGCATCTACATCTCCTGATCTTACACTCAAGCTATAA 660 0.4485 MMTPNLNLEPENQSESPHDLDSMTLDLTLNFSSSEGELMGSSDASSEVGAAEAHASPSVTPRVFSCNYCKRKFYSSQALGGHQNAHKRERTMAKRAMRMGMFTERYTSLASLPLHGSPFRSLGVEAHSAMHQRREMQPSSSMRAPDMRAAAKFDRNHFGSLVFVEDDDVGCFWPGSFRQVNQGRGVNIGYPPQTSNSSFVPMAPPPPQASTSPDLTLKL* 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g4075 219 ProSiteProfiles Zinc finger C2H2 type domain profile. 64 91 IPR013087 -
Mal7g4075 219 MobiDBLite consensus disorder prediction 184 219 - -
Mal7g4075 219 MobiDBLite consensus disorder prediction 1 21 - -
Mal7g4075 219 ProSitePatterns Zinc finger C2H2 type domain signature. 66 86 IPR013087 -
Mal7g4075 219 PANTHER ZINC FINGER PROTEIN 3-RELATED 16 219 - -
Mal7g4075 219 PANTHER ZINC FINGER PROTEIN JAGGED 16 219 IPR045320 GO:0003700
Mal7g4075 219 Gene3D Classic Zinc Finger 40 111 - -
Mal7g4075 219 SUPERFAMILY beta-beta-alpha zinc fingers 61 92 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g4075 Mal-Chr7 107297733 107298392 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g4075 57 219 C2H2 Transcription Factor Family AT1G66140 46.277 4.89e-44 146
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mal7g4075 None None None
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal7g4075 7 107297733 107298392 Mal7g4075 7 107297733 107298392 ECH