Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g4070 ATGGGTTGTTCTCAAATGGGTTTTCTCTTCTTTTGCTCTATACTTTTTGTTTCCGTTCATGCTTCATCCAGAAATTTACCTATTACAGCTTTTGATGAAGGGTACACACCCTTGTTTGGGGATAATAACGTCTTTGTTCATAGAGATGGCAAATCGGTGCATCTTTCGTTAGATGAAAGAACAGGTTCTGGATTTGTGTCTCATGATATATACCTTCATGGGTATTTCAGTGCTTCGATTAAGTTACCTGCTGATTACACTGCCGGTGTTGTGGTTGCCTTTTATATGTCAAATGGTGACATGTATGAGAAGAACCATGATGAAATAGACTTTGAGTTTTTGGGAAACATTAGAGGCAAAGACTGGAGGATTCAGACCAATGTTTATGGCAATGGAAGCACCAACATTGGCAGAGAGGAAAGATATGGTCTCTGGTTTGATCCTGCAGAGGATTTCCATCAATACAGTATTCTCTGGACAGATTCTCGTATCATATTTTATGTAGATAACATTCCTATTAGAGAAGTTACGCGAACAAAATCGATGGGAGGAGATTTCCCCGCCAAGCCTATGACTCTTTATGCGACAATATGGGATGCATCAGATTGGGCTACCAATGGTGGAAAGTACAGAGTTAACTACAAGTATGCACCATATGTCGCCAAATTCTCCGACTTTGTCCTACATGGTTGTGCAGTTGATCCGATCGAGCATGTAGCCAAGTGTGACGCTGCTCAAAGTTCCGAATCCATTCCTTCTGGTGTTACACCAGCACAAAGAATCAAAATGGAGAACTTTAGGAAGAAGTACATGACATACTCTTACTGTTACGACAAAATCAGGTACAAAGCCACCCCTCCATCAGAGTGCGTTATCAATCCACAAGAAGCTGAAAGGCTAAGAAAATTCGACCCTGTCACATTCGGCAGCGGCAGACACCGTCATGGAAAACGACACCACCACAGCAGAGGAAACCACGCTGAAGCTGCTTCATTTTAA 999 0.4204 MGCSQMGFLFFCSILFVSVHASSRNLPITAFDEGYTPLFGDNNVFVHRDGKSVHLSLDERTGSGFVSHDIYLHGYFSASIKLPADYTAGVVVAFYMSNGDMYEKNHDEIDFEFLGNIRGKDWRIQTNVYGNGSTNIGREERYGLWFDPAEDFHQYSILWTDSRIIFYVDNIPIREVTRTKSMGGDFPAKPMTLYATIWDASDWATNGGKYRVNYKYAPYVAKFSDFVLHGCAVDPIEHVAKCDAAQSSESIPSGVTPAQRIKMENFRKKYMTYSYCYDKIRYKATPPSECVINPQEAERLRKFDPVTFGSGRHRHGKRHHHSRGNHAEAASF* 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g4070 332 CDD GH16_XET 29 290 IPR016455 GO:0010411|GO:0016762|GO:0042546
Mal7g4070 332 ProSiteProfiles Glycosyl hydrolases family 16 (GH16) domain profile. 21 223 IPR000757 GO:0004553|GO:0005975
Mal7g4070 332 PIRSF EndGlu_transf 2 295 IPR016455 GO:0010411|GO:0016762|GO:0042546
Mal7g4070 332 PANTHER XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 27-RELATED 7 311 - -
Mal7g4070 332 SUPERFAMILY Concanavalin A-like lectins/glucanases 30 294 IPR013320 -
Mal7g4070 332 Gene3D - 17 290 - -
Mal7g4070 332 MobiDBLite consensus disorder prediction 308 332 - -
Mal7g4070 332 Pfam Glycosyl hydrolases family 16 33 215 IPR000757 GO:0004553|GO:0005975
Mal7g4070 332 Pfam Xyloglucan endo-transglycosylase (XET) C-terminus 253 290 IPR010713 GO:0005618|GO:0006073|GO:0016762|GO:0048046
Mal7g4070 332 PANTHER XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 8-RELATED 7 311 IPR044791 GO:0004553
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g4070 Mal-Chr7 107187594 107189756 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g4070 8 331 Glycoside Hydrolase AT1G14720 69.113 1.70e-169 473
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal7g4070 7 107187594 107189756 Mal7g4070 7 107187594 107189756 ECH