Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g2310 ATGAGGCCGTCGATGCTCAGATCCGTCCACTCCGCCGTATCCCGCAGCATAACCCGCCGTGGTTATGCTACGGAACCAGTACCAGAACGCAAGGTGGCCATTCTAGGCGCTGCCGGTGGGATCGGTCAGCCCCTCTCTCTTCTGATGAAGCTCAACCCTCTCGTTTCAACCTTATCTCTTTATGATATTGCTGGAACCCCCGGTGTTGCCGCCGATGTCAGCCACATCAACTCCAGATCTGAGGTAACTGGGTACGCAGGTGAAGAAGAGCTTGGAAAAGCTTTGGAGGGTGCTGATGTTGTTATAATTCCTGCTGGTGTTCCTAGAAAGCCTGGAATGACTCGTGATGATCTTTTCAACATCAATGCCGGCATTGTCAAGTCACTGGCCACTGCTATTGCTAAGTACTGCCCCCATGCCCTTGTTAACATGATAAGCAACCCTGTGAACTCCACCGTTCCCATTGCTGCAGAGGTTTTCAAGAAGGCAGGGACATATGACGAGAAGAGATTGTTTGGGGTTACAACCCTTGATGTAGTTAGGGCAAAAACTTTCTATGCTGGGAAAGCTAAAGTTCCAGTTGCGGAGGTCAATGTACCTGTTGTAGGAGGCCATGCAGGAGTTACTATTCTCCCACTATTTTCTCAGGCAACACCTAAAGCCAATCTGGACGATGATGTCATTAAGGCTCTAACAACGAGGACACAAGATGGAGGAACTGAGGTTGTGACTGCCAAGGCTGGAAAGGGTTCTGCAACTCTGTCAATGGCTTATGCTGGAGCCATATTTGCTGATGCTTGCCTCAAAGGTCTAAACGGAGTTCCAGATGTTGTTGAGTGCTCATATGTGCAATCCAATATCATTGCTGAACTTCCTTTCTTTGCTTCCAAGGTGAGGATTGGGAAGAATGGTGTGGAAGAAATTCTGGGCTTAGGTTCTCTCTCAGATTTCGAGCAGGAAGGCCTTGAAAAATTGAAGTCCGAACTCAAATCATCTATTGAGAAGGGAATCAAATTTGCCTCCCAGTAA 1029 0.481 MRPSMLRSVHSAVSRSITRRGYATEPVPERKVAILGAAGGIGQPLSLLMKLNPLVSTLSLYDIAGTPGVAADVSHINSRSEVTGYAGEEELGKALEGADVVIIPAGVPRKPGMTRDDLFNINAGIVKSLATAIAKYCPHALVNMISNPVNSTVPIAAEVFKKAGTYDEKRLFGVTTLDVVRAKTFYAGKAKVPVAEVNVPVVGGHAGVTILPLFSQATPKANLDDDVIKALTTRTQDGGTEVVTAKAGKGSATLSMAYAGAIFADACLKGLNGVPDVVECSYVQSNIIAELPFFASKVRIGKNGVEEILGLGSLSDFEQEGLEKLKSELKSSIEKGIKFASQ* 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g2310 342 Pfam lactate/malate dehydrogenase, NAD binding domain 31 173 IPR001236 GO:0016491
Mal5g2310 342 Pfam lactate/malate dehydrogenase, alpha/beta C-terminal domain 175 339 IPR022383 GO:0016616
Mal5g2310 342 SUPERFAMILY LDH C-terminal domain-like 174 340 IPR015955 GO:0003824|GO:0016616
Mal5g2310 342 TIGRFAM MDH_euk_gproteo: malate dehydrogenase, NAD-dependent 31 340 IPR010097 GO:0006099|GO:0030060
Mal5g2310 342 ProSitePatterns Malate dehydrogenase active site signature. 174 186 IPR001252 GO:0006108|GO:0016615
Mal5g2310 342 PANTHER MALATE DEHYDROGENASE 2 341 - -
Mal5g2310 342 PIRSF Lac_mal_DH 26 340 IPR001557 GO:0016616|GO:0019752
Mal5g2310 342 Gene3D - 175 341 IPR015955 GO:0003824|GO:0016616
Mal5g2310 342 CDD MDH_glyoxysomal_mitochondrial 31 340 IPR010097 GO:0006099|GO:0030060
Mal5g2310 342 Gene3D - 29 174 - -
Mal5g2310 342 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 31 173 IPR036291 -
Mal5g2310 342 PANTHER MALATE AND LACTATE DEHYDROGENASE 2 341 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g2310 Mal-Chr5 60664122 60667588 Dispersed