Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g2302 ATGACTTGTTGCTCTCATTTTTTTAGAAATAAAAGGTCTTGTTCAGCCACCCGAACCGATATAGACATTTCAGAACTTCACAATGTCAAAATTTACACTTACAAGGAACTGCGAATCGCCACTTCCGGGTTTAGTCTTGCAAACAAGATAGGACAAGGAGGTTTTGGATTAGTCTATAAGGGAAAGTTGAGTGATGGATGTCTGGTAGCTATAAAGGTTTTATCCGCTGAATCAAAACAAGGGGTGCAGGAGTTCTTGACAGAAATCAAGGTCATCTCTAGTATAGAGCACGAGAATCTAGTCAAGTTGTATGGATGCTGTGTTGAAGACAATCATAGGATTTTGGTATATGGCTATCTTGAGAACAATAGCCTAGCACAAACACTTCTTGGTTCAGGCCACAATAGCATTAAATTCAACTGGCATGTAAGGCGCAGCATTTGCGTAGGTGTGGCTCGAGGGCTTGCATTCCTTCATGGGGAGGTTCGGCCGCATATCATTCATAGAGATATTAAAGCCAGCAATGTATTACTTGACACAGATCTCCGACCCAAAATTTCAGATTTTGGCCTTGCAAAACTTATTCCTCCAAACTTGACTCATATTAGTACAAGGGTTGCTGGAACTGCGGGTTATGTGGCACCTGAGTATGCAATACGAAATCAAGTGACAAGAAAATCGGACATCTATAGTTTTGGTGTGCTACTATTAGAAATTGTTAGCGGGAGACCCAACACAAACAGACGCTTACCTGTTAAAGAACAATATCTTCTTACAAGGGCATGGGATTTATATGAGGAAGGGGAGATAAAATGTTTGGTAGATGCTTTTCTAGAAGGGGACTTCAATGTTGAGGAGGCAGTCAGATTTTGCAAGATTGGTCTTCTTTGCACGCAAGATTCTCCTCAGCTCCGGCCTTCTATGTCCACCGTGCTTAAAATGCTTATTGGTGAAAAAGATGTGAATGATGATAATATAATAAAACCAGGCATGATATTTGAATTTGTAGATGCCAATGATCAAGTGAACAAAAGAGGTAAGGCTGAAGTGGAAAGTACATGTACTTCTTTGTTGCCTGGTTCAGGGAATCAAGATGATTCATCTTCATCAGGAACGGGGACCTCTTTTGCTACCATGACTTTCACTGCAATTTATGATCGAACCAATTAA 1170 0.406 MTCCSHFFRNKRSCSATRTDIDISELHNVKIYTYKELRIATSGFSLANKIGQGGFGLVYKGKLSDGCLVAIKVLSAESKQGVQEFLTEIKVISSIEHENLVKLYGCCVEDNHRILVYGYLENNSLAQTLLGSGHNSIKFNWHVRRSICVGVARGLAFLHGEVRPHIIHRDIKASNVLLDTDLRPKISDFGLAKLIPPNLTHISTRVAGTAGYVAPEYAIRNQVTRKSDIYSFGVLLLEIVSGRPNTNRRLPVKEQYLLTRAWDLYEEGEIKCLVDAFLEGDFNVEEAVRFCKIGLLCTQDSPQLRPSMSTVLKMLIGEKDVNDDNIIKPGMIFEFVDANDQVNKRGKAEVESTCTSLLPGSGNQDDSSSSGTGTSFATMTFTAIYDRTN* 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g2302 389 CDD STKc_IRAK 50 315 - -
Mal5g2302 389 ProSitePatterns Protein kinases ATP-binding region signature. 50 72 IPR017441 GO:0005524
Mal5g2302 389 Gene3D Phosphorylase Kinase; domain 1 15 119 - -
Mal5g2302 389 SMART serkin_6 44 304 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal5g2302 389 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 1 375 - -
Mal5g2302 389 ProSiteProfiles Protein kinase domain profile. 44 321 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal5g2302 389 SUPERFAMILY Protein kinase-like (PK-like) 23 315 IPR011009 -
Mal5g2302 389 Pfam Protein kinase domain 46 247 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal5g2302 389 ProSitePatterns Serine/Threonine protein kinases active-site signature. 166 178 IPR008271 GO:0004672|GO:0006468
Mal5g2302 389 Gene3D Transferase(Phosphotransferase) domain 1 120 328 - -
Mal5g2302 389 PANTHER RECEPTOR-LIKE KINASE 1 375 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g2302 Mal-Chr5 60364691 60367595 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g2302 32 332 Receptor kinase-like Gene Family AT1G56120 55.150 2.40e-104 326
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mal5g2302 Pkinase 1e-47 CL0016