Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g0367 ATGAATATTTTGAAAAATTCCATAAATGCTCCAAGTACCTTCCAATGGACAGGTCCTGATGTATGTAAATGGAATCATATTAATTGCGATTCAAGAAAACGTGTCACCACAATTCAAATAGGGAACCAAAATCTTCAAGGCTTTCTCCCAAAGGAACTTGCGATGCTGACAGCATTGCAACATTTCGAGTGTCAAAGCAATGGCCTCACCGGTCCATTCCCTTACCTCTCAAAATCATTACAAATTCTTCTAATACACGACAACAAATTTAGCTTTATTCCTAGCGATTTCTTCACGGGGATGAGCAGTTTGCAGGAAGTAAAAATTGACGACAACCCTTTGTCCCCATGGCAAATTCCTAATTCTCTTAAAGATTGTGTTGCACTCCAAATTTTCAGTGCTCAAAGTGCTGGCATTGTTGGAACTATTCCAACTTTTTTTGGAAAAGGTGGTCCCTTCCCTGGGTTGTTTTTTTTGGCATTGTCTGGTAATTCCTTAGAAGGTGTTTTACCTACAAGCCTTTCTGGAAGTTCAATAGAGAACCTTTTGGTCAATGGGCAAACTAGCGACAATAAGCTCGATGGTACCCTTGCCGTGTTACAAAACATGGTATCTTTGAAACAAATATGGGCTAATGGTAATTCATTTACCGGTCCTATACCCGATTTATCACGCCTTAACCAACTATATGATGTGAATTTCAGGGATAATCAGTTGACTGGTGTTGTTCCACCTTCTCTAATCAACCTTCCAAGCTTGCAAGTAGTGAAATTAACAAATAATAATCTTCAAGGTTCACCTCCCAAGTTTAGAGATGGTGTTGTAGTTGATAATAATATTAATGGGGGTAGAAACCGGTTTTGCACAAATGTTTTGGGGCAACCATGTAGCCCTCTTGTGAATATTTTGCTATCAATTGCTGAACCTTTGGGTTATCCTCTTAAGTTTGCTGAAAGTTGGAAGGGTAATGATCCTTGTGCTAATAAATGGATAGGTATAGTTTGTTCTGGTGGAAATATTTCAATTATCAATTTCCAGAACATGGGACTAACTGGAACTATTTCTTCGAATTTTGCCAGTCTTTCATCTTTGACAAAATTGCTTCTTGCAAACAATGGCCTTACTGGTACCATACCAAATCAACTTACTAGTATGCCTCTTCTACAAGAATTGGATGTTTCTAATAATAATTTGTATGGTCGTGTACCATCATTTCCAAAAGGTGTGGTTCTAAAGTTGAGTGGGAATCCTGATATTGGGAAGGATAAACCCACTAGTATGAGTAGATCTGGTAACATAAGCGTCGGCGTGATTGTTGGAATTGTGTTGGGGGTTGTTATTGTACTTGGTATTGGGGCAATAATAATATTTAAGTTTAGGAAAAGGCCGAAGAGTCATGCGGGGAAAGGTAAAAAACATGATGTAATAACACTACATCCTAGATATCAAGACGGTGAAAATGTTGTGAAGGTGGGTGATGTTGTTGGTGGTAATGGAAGTGATACATTAAGTCCCACTAGTAATGTTTATGAAGCTAATAACATGGTGATTTCAATTAAAATTTTGAGACAAGTTACATTTAATTTTAGTGAGGAAAAAATAGTTGGGAAAGGTGGTTTTGGCACTGTGTACAAAGGGGAGTTGCACGATGGGACACAAATTGCAGTGAAAAGGATGCAATTAGGAATGGTGGACGAAGAAGGATCAAATGAATTCACATCAGAGATTAAAGTGCTTACAAAGGTTCGACACAAACATTTGGTTTCACTCTTAGGTTATTGTTTGGATGGGAATGAGAAACTTTTGGTTTATGAATACATGCCTCAAGGTGCTTTAAGCAAACATTTATTCAATTGGAAAGATGAAGGGATAAAACCTTTGGAATGGAAGACACGACTTATTATTGCCTTAGATGTTGCTAGAGGTGTGGAATATCTTCATGGGTTAACCGAACAAATTTTTATCCATAGGGATATCAAATCATCCAACATTTTGCTTGGAGAAGATATGCGGGCTAAAGTATCTGACTTTGGATTGGTTCGGCTTGCTCCTGAAGGAAAAGCTTCATTTCAAACTAGACTTGCCGGAACTTTTGGATATATGGCACCAGAGTATGCAGCAACTGGAAGACTAACAACAAAGGCCGATGTATATAGTTTTGGTGTGGTTCTTATGGAGATCATAACAGGAAGGAAAGCACTCGATGGTAGCCAACCAGAAGAGAATATACATCTTGTTACATGGTTTCGTAGGATGTTATTAAATAAGGATTCGTTTCAAACAATCATTGATTGGACAATTGAGGTTGATGAAGAAACATATGCAAGCATAAACATAGTTGCTGAGTTAGCCGGACATTGTAGTGCGAGGGAGCCTTATCAGCGTCCTGACATGAGTCATGCAGTGAATGTGTTATCGTCCCTTGTTGAAGTGTGGAAGCCTACAGAACAAGATGTTGATGATGTATACGGGATCAACTTTGATATGACATTACCAGAAGCTCTCCAAAGGTGGCAAGCTTTTGAAGGAAGCAGCACCCTCGAGTCAACTCTTTCCCCTTCGACAGTGGATACTAGTGGAGGCACCACACAAACTTGTCAATCTTCAAGTGCGTCTTCACATGCATAA 2628 0.3889 MNILKNSINAPSTFQWTGPDVCKWNHINCDSRKRVTTIQIGNQNLQGFLPKELAMLTALQHFECQSNGLTGPFPYLSKSLQILLIHDNKFSFIPSDFFTGMSSLQEVKIDDNPLSPWQIPNSLKDCVALQIFSAQSAGIVGTIPTFFGKGGPFPGLFFLALSGNSLEGVLPTSLSGSSIENLLVNGQTSDNKLDGTLAVLQNMVSLKQIWANGNSFTGPIPDLSRLNQLYDVNFRDNQLTGVVPPSLINLPSLQVVKLTNNNLQGSPPKFRDGVVVDNNINGGRNRFCTNVLGQPCSPLVNILLSIAEPLGYPLKFAESWKGNDPCANKWIGIVCSGGNISIINFQNMGLTGTISSNFASLSSLTKLLLANNGLTGTIPNQLTSMPLLQELDVSNNNLYGRVPSFPKGVVLKLSGNPDIGKDKPTSMSRSGNISVGVIVGIVLGVVIVLGIGAIIIFKFRKRPKSHAGKGKKHDVITLHPRYQDGENVVKVGDVVGGNGSDTLSPTSNVYEANNMVISIKILRQVTFNFSEEKIVGKGGFGTVYKGELHDGTQIAVKRMQLGMVDEEGSNEFTSEIKVLTKVRHKHLVSLLGYCLDGNEKLLVYEYMPQGALSKHLFNWKDEGIKPLEWKTRLIIALDVARGVEYLHGLTEQIFIHRDIKSSNILLGEDMRAKVSDFGLVRLAPEGKASFQTRLAGTFGYMAPEYAATGRLTTKADVYSFGVVLMEIITGRKALDGSQPEENIHLVTWFRRMLLNKDSFQTIIDWTIEVDEETYASINIVAELAGHCSAREPYQRPDMSHAVNVLSSLVEVWKPTEQDVDDVYGINFDMTLPEALQRWQAFEGSSTLESTLSPSTVDTSGGTTQTCQSSSASSHA* 876
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g0367 875 Gene3D Phosphorylase Kinase; domain 1 497 606 - -
Mal5g0367 875 ProSiteProfiles Protein kinase domain profile. 529 809 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal5g0367 875 SUPERFAMILY L domain-like 24 420 - -
Mal5g0367 875 SUPERFAMILY Protein kinase-like (PK-like) 510 815 IPR011009 -
Mal5g0367 875 ProSitePatterns Protein kinases ATP-binding region signature. 535 557 IPR017441 GO:0005524
Mal5g0367 875 SMART LRR_typ_2 78 100 IPR003591 -
Mal5g0367 875 SMART LRR_typ_2 250 272 IPR003591 -
Mal5g0367 875 SMART LRR_typ_2 385 412 IPR003591 -
Mal5g0367 875 SMART LRR_typ_2 153 176 IPR003591 -
Mal5g0367 875 SMART LRR_typ_2 361 384 IPR003591 -
Mal5g0367 875 Gene3D Ribonuclease Inhibitor 1 293 IPR032675 -
Mal5g0367 875 CDD STKc_IRAK 535 808 - -
Mal5g0367 875 Pfam Leucine rich repeat N-terminal domain 303 336 IPR013210 -
Mal5g0367 875 Pfam Leucine rich repeat N-terminal domain 4 30 IPR013210 -
Mal5g0367 875 MobiDBLite consensus disorder prediction 849 875 - -
Mal5g0367 875 SMART serkin_6 529 809 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal5g0367 875 ProSitePatterns Serine/Threonine protein kinases active-site signature. 654 666 IPR008271 GO:0004672|GO:0006468
Mal5g0367 875 Pfam Protein tyrosine and serine/threonine kinase 532 800 IPR001245 GO:0004672|GO:0006468
Mal5g0367 875 PANTHER TRANSFERASE, PROTEIN KINASE RLK-PELLE-LRR-IX FAMILY-RELATED 1 869 - -
Mal5g0367 875 PANTHER OSJNBA0070M12.3 PROTEIN 1 869 - -
Mal5g0367 875 Gene3D Ribonuclease Inhibitor 299 423 IPR032675 -
Mal5g0367 875 Gene3D Transferase(Phosphotransferase) domain 1 607 828 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g0367 Mal-Chr5 5678355 5681430 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g0367 38 818 Receptor kinase-like Gene Family AT1G55610 30.595 6.85e-87 299
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IX Mal5g0367 PK_Tyr_Ser-Thr 1.5e-48 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g0367 5 5678355 5681430 Mal5g0367 5 5678355 5681430 ECH