Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g0349 ATGGTTTCAAGATCTTATTCAAACCTACTAGAGCTAGCCTCTGGTGAGTCTCCAACTTTTGAAAACATAAACAGGAGAATTCCAAGGATTATGACTGTTGCTGGTTTGATATCTGATGTTGATGATGACCCTTTGGAGAGTGTTTGTTCTGACCCTTCTTCTTCATCTGTCCAACGAGAAAGGATCATAATAGTGGCTAATCAGTTACCTATAAAGGCTCATAGGAAGCAAGATGGTAATAACATGAATAAATGGTTTTTCAGTTGGGATGAGAACTCACTTCTACTTCAACTCAAAGATGGGTTAGGAGATGATGATACTGATGTTATTTATGTTGGATGTCTTAAGGAAGATGTTCATCCAAATGAACAAGATGAGGTTTCACAGATACTTCTTGAGACCTTTAAATGTGTTCCAACTTTTCTCCCAGGTGATCTTTTTACTAGGTATTATCATGGCTTTTGCAAGCAACAGTTATGGCCACTGTTCCATTACATGTTGCCTCTGTCACCAGGCCTTGGTGGTAGGTTCAATAGGTCATTGTGGCAGGCTTATGTATCAGTCAATAAGATATTTGCTGATAGGATTATGGAAGTGATTAACCCTGAAGATGATTATGTTTGGATACATGATTATCATCTCATGGTTTTACCAACTTTCTTGAGGAAGAGGTTTAATAGAGTCAAACTTGGATTCTTTCTCCACAGCCCTTTCCCTTCATCAGAAATTTACAAGACATTGCCTATTAGGGAAGAGCTTTTGAGAGCCCTTTTGAATTCTGATTTGATTGGTTTCCACACTTTTGATTATGCAAGACATTTCCTATCATGTTGTAGTAGGATGCTTGGTCTTACCTATGAATCCAAAAGGGGTTATATTGGGATTGAGTATTATGGTAGGACAGTTAGTATCAAAATTCTTCCTGTTGGCATACACATGGGTCAGCTTCAATCAGTTCTAAGCCTACCAAAGACTGAAGAGAAAGTTTCTGAGCTCATAACACAATTTTCTGATAAAGGAAAGATGATGTTACTTGGTGTGGATGACACAGATATCTTTAAGGGGATAAGTTTGAAGTTGTTAGCCATGGAGCAGCTTCTTATTCAGCACCCTGAGTGGCATGGAAAGGTTGTATTGGTTCAGATAGCCAATCCTGCAAGAGGGAAAGGGAAGGAAGTGCAAGCCGAGACGAAGGCGACGGCGGAGCGGATTAATGAAAGATTTGGGAAACCTGGTTATGATCCTGTCGTTCTGATTGAGGAGCCATTAAGGTTTTATGAAAAAGTTGCATACTATGTTGTAGCTGAGTGTTGTTTGGTGACTGCAGTTAGGGATGGAATGAATCTTATACCTTATGAATATATAATCAGTCGTCAAGGAACTGATAAATTGGACAAAGTTTTGGGTATAGGTGCTTCCTCTAAGAAAAGCATGTTGGTTGTGTCTGAATTTATTGGTTGTTCACCATCCTTAAGTGGAGCTATCAGAGTGAATCCATGGAATATTGATGCAGTAGCAGATGCAATGGACTCGGCTTTGGAAATGGCTGATTCAGAGAAACAGCTTAGGCACGAGAAGCATTACAGATATGTTAGTACTCATGATGTCGGTTACTGGGCTCGTAGCTTTTTGCAAGATTTGGAAAGGATTTGTAGTGATCATGTAAGGAGAAGGTGGTGGGGAATTGGTTTTGGATTAAGTTTTAGAGTTGTAGCACTTGATCCAAACTTCAAGAAGCTTTCAATGGAGCACATTGTTTCTGCTTACAAGCAGACGAAAACTAGGGCGATCCTTCTAGATTATGATGGTACACTAATGCCTCAGGCTTCCATTGATAAGAGTCCAACAAGTAATTCAATTAATATGCTTAATAGTTTGTGTAGAGATGAGAACAACATGGTGTTTATAGTAAGTGCTAAAAGCCGAAAGGCACTTACTGAATGGTTTTCTCCTTGTGAAAATCTGGGAATTGCTGCTGAGCATGGTTACTTTTTAAGACTGAAGCGAGATGCAGAATGGGAAACATGTGTACCTGTAGCAGACTGCAGTTGGAAACAAATTGCAGAGCCTGTGATGAAGCTTTACACCGAAACAACCGATGGATCCACGATTGAAGATAAGGAGACGGCACTTGTTTGGTGCTATGAGGATGCAGATCCAGACTTTGGATCATGCCAAGCTAAAGAACTTCTTAATCATCTTGAAAGTGTGCTTACAAATGAACCAGTAACAGTGAAGAGTGGCTTGAATAATGTAGAGGTGAAACCACAGGGTGTGAACAAGGGACTTGTGGCTAAACGCCTACTTTCGGCCATGCAAGAAAAGGGAATGTCACCTGAATTTGTTTTGTGTATTGGCGACGACAGATCTGATGAAGACATGTTTGAGGTCATCACCAGTTCTGGTCCTTCCATGGCTCCCAGGGCTGAAGTATTTGCATGCACTGTTGGTCGAAAACCCAGCAAGGCCAAGTACTACCTGGATGATACTACCGATATAGTGAGAATGGTGCAGGGTTTAGCCTGTGTTTCAGACCAAATAGTTTTATCTTAG 2553 0.4046 MVSRSYSNLLELASGESPTFENINRRIPRIMTVAGLISDVDDDPLESVCSDPSSSSVQRERIIIVANQLPIKAHRKQDGNNMNKWFFSWDENSLLLQLKDGLGDDDTDVIYVGCLKEDVHPNEQDEVSQILLETFKCVPTFLPGDLFTRYYHGFCKQQLWPLFHYMLPLSPGLGGRFNRSLWQAYVSVNKIFADRIMEVINPEDDYVWIHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYKTLPIREELLRALLNSDLIGFHTFDYARHFLSCCSRMLGLTYESKRGYIGIEYYGRTVSIKILPVGIHMGQLQSVLSLPKTEEKVSELITQFSDKGKMMLLGVDDTDIFKGISLKLLAMEQLLIQHPEWHGKVVLVQIANPARGKGKEVQAETKATAERINERFGKPGYDPVVLIEEPLRFYEKVAYYVVAECCLVTAVRDGMNLIPYEYIISRQGTDKLDKVLGIGASSKKSMLVVSEFIGCSPSLSGAIRVNPWNIDAVADAMDSALEMADSEKQLRHEKHYRYVSTHDVGYWARSFLQDLERICSDHVRRRWWGIGFGLSFRVVALDPNFKKLSMEHIVSAYKQTKTRAILLDYDGTLMPQASIDKSPTSNSINMLNSLCRDENNMVFIVSAKSRKALTEWFSPCENLGIAAEHGYFLRLKRDAEWETCVPVADCSWKQIAEPVMKLYTETTDGSTIEDKETALVWCYEDADPDFGSCQAKELLNHLESVLTNEPVTVKSGLNNVEVKPQGVNKGLVAKRLLSAMQEKGMSPEFVLCIGDDRSDEDMFEVITSSGPSMAPRAEVFACTVGRKPSKAKYYLDDTTDIVRMVQGLACVSDQIVLS* 851
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g0349 850 CDD HAD_TPP 596 835 - -
Mal5g0349 850 Pfam Trehalose-phosphatase 598 830 IPR003337 GO:0003824|GO:0005992
Mal5g0349 850 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 1 847 IPR001830 GO:0003824|GO:0005992
Mal5g0349 850 Gene3D Glycogen Phosphorylase B; 53 317 - -
Mal5g0349 850 SUPERFAMILY HAD-like 595 840 IPR036412 -
Mal5g0349 850 Gene3D Glycogen Phosphorylase B; 318 532 - -
Mal5g0349 850 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 61 551 - -
Mal5g0349 850 CDD GT20_TPS 61 548 IPR001830 GO:0003824|GO:0005992
Mal5g0349 850 Pfam Glycosyltransferase family 20 61 548 IPR001830 GO:0003824|GO:0005992
Mal5g0349 850 Gene3D - 597 827 IPR023214 -
Mal5g0349 850 TIGRFAM HAD-SF-IIB: HAD hydrolase, family IIB 597 798 IPR006379 -
Mal5g0349 850 TIGRFAM T6PP: trehalose-phosphatase 593 840 IPR003337 GO:0003824|GO:0005992
Mal5g0349 850 Gene3D - 677 757 - -
Mal5g0349 850 PANTHER ALPHA,ALPHA-TREHALOSE-PHOSPHATE SYNTHASE [UDP-FORMING] 6 1 847 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g0349 Mal-Chr5 5484474 5487992 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g0349 1 848 Trehalose Biosynthesis Gene Families AT1G68020 80.231 0.0 1445
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g0349 5 5484474 5487992 Mal5g0349 5 5484474 5487992 ECH