Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g0339 ATGTCATCACCAAACTACGCTCACGCGCCACTCCTTCGCCCCCGCCGCACGCCCGTCCTCGCCCTCCTTCTCGGACGACGCGGTCCTTCTGTCTTAGTCCGTGAAACCGCCGCGCGTGAGCTCGAGGAGCGTCGTGCCGATTGGGGATACTCCAAGCCGGTGGTTTTACTCGACGTGACATGGAACACGGCTTTTGTGCTGGTTGCGGCGGTTATGTTAGGTTGCAGTGTAGATGAGAATCCGAACACTCCGATCCGGTTGTGGATCTTTGGCTATGCGGTGCAGTGTTTGGTACACGTCGCGTTGGTGTTGTTGGAGTATAGGAGGAGGAATGGGATTGGGGGAGGAGGAGGAAGAGATGAAGAATCTCTTGATAATGATGATGTCAATGATAGTGAGGATGATGATTATGTTGAATTTCAAAATTCTTCTCGCTCCGGATTTGCAAAACGATGTGCATCATTGAATACCATGATTTCATTGCTTTGGTGGATGGTGGGCTTTTACTGGGTTGTCTATGGTGGTGATATTCTAATGCAAGATGCTCCACGTTTGTACTGGTTGACTGTTGTCTTTCTAGCATTTGATGTCTTCTTTGCTATCTTTTGTGTTGCTTTGGCATGCTTAATTGGCATTGCCCTCTGCTGCTGTTTACCATGTATTATTGGTATTCTCTATGCTGTTGCAGGACAGGAGGGTGCATCTGAATCAGATCTCAGTACACTTCCAAAATACAGGTTTCAAGTGCTAGGCAATGAGGAAGCACCTAGTCCGAGAGGTGGATCAATGGTTCCAATTGAAAATAGCAGTGGTGCAAATGAACGAGTACTTTCACCTGAGGACGCGGAATGCTGTATATGCATCTCTCCCTACGAGGATGAAGCAGAACTCCATGCTCTTCCTTGTGACCACCATTTCCATTCCACGTGCATAGTGAAATGGTTAAAGATGAATGCAACTTGTCCTCTTTGCAAGTTCAATATTCTAAAGGGAAATGAACAGGTGTGA 1008 0.4742 MSSPNYAHAPLLRPRRTPVLALLLGRRGPSVLVRETAARELEERRADWGYSKPVVLLDVTWNTAFVLVAAVMLGCSVDENPNTPIRLWIFGYAVQCLVHVALVLLEYRRRNGIGGGGGRDEESLDNDDVNDSEDDDYVEFQNSSRSGFAKRCASLNTMISLLWWMVGFYWVVYGGDILMQDAPRLYWLTVVFLAFDVFFAIFCVALACLIGIALCCCLPCIIGILYAVAGQEGASESDLSTLPKYRFQVLGNEEAPSPRGGSMVPIENSSGANERVLSPEDAECCICISPYEDEAELHALPCDHHFHSTCIVKWLKMNATCPLCKFNILKGNEQV* 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g0339 335 SMART ring_2 284 324 IPR001841 -
Mal5g0339 335 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 3 335 - -
Mal5g0339 335 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 265 333 IPR013083 -
Mal5g0339 335 Pfam Ring finger domain 283 325 IPR001841 -
Mal5g0339 335 SUPERFAMILY RING/U-box 274 329 - -
Mal5g0339 335 ProSiteProfiles Zinc finger RING-type profile. 284 325 IPR001841 -
Mal5g0339 335 PANTHER TARGET OF ERK KINASE MPK-1 3 335 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g0339 Mal-Chr5 5399742 5404416 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g0339 1 334 C3H Transcription Factor Family AT1G68070 66.000 7.70e-162 454
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g0339 5 5399742 5404416 Mal5g0339 5 5399742 5404416 ECH