Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g0338 ATGTCGTGGGAAGACGAGATTGTGATTCGTGACGTCACCAACGCCGGTCTCGTCGTCAGTGATCGAATTGGCCGCGAAGTTTCTTCTCAGCTCGACCTCGAAGAATCTCTAGAAGCTTCTAGATATGCTAGTCATCCTTATTCTACTCACCCTCGAGAGTGGCCACCTTTAGTTGAGGTAGCGAATACATGGGAGTTGCCTCCTGTACTTATTGAAAGATACAATGCGGCTGGTGGGGAAGGGACTGCTTTTTGTGGAATATTTCCTGAAATACGTAGGGCATGGGCCTCCGTGGACAATTCATTGTTTATGTGGCGTTTTGATAAGTGGGATGGCCAGTGTCCTGAATATAGTGGGGAGGAACAAGCTATTTGTGCTGTTGGTCTTTCAAAATCAAAGCACGGTGTTTTTGTTGAAGCTATCCAATATCTATTAATCTTAGCAACCCCTGTTGAGTTAATTTTAGTTGGAGTGTGCTGCTCTGGAGGAGCAGATGGCTCAGATCCATTTTCAGAAGTTTCATTACAGCCATTGCCTGATTATACAATACCATCCGATGGGGTTACAATGACATGTGTAGCATGTACCGATAAAGGCCGCATTTTCCTTGCTGGTCGTGATGGCCACATATATGAGCTTCTCTATTCAACTGGCTCTGGATGGCAAAAGCGCTGCAGAAAAGTATGTGTCACTGCTGGTCTAGGAAGTGTAATTTCAAGATGGGTCATACCTAATGTTTTCAATTTTGGAGCTGTTGACCCTGTTGTTGAAATGGTTTTTGACAATGAGAGACAGATATTGTATGCACGGACTGAAGAGATGAAGCTTCAGGTTTATGTTCTAGGACCAATTGGTGATGGGCCATTAAAGAAAATTGCTGAAGAAAGGAATCTTGTCAATCAGAGAGATCCACATCATGGAGCTAGACAATCAAGTGGATCAAGAGTATCAAGTCGATCACCGAAGCCATCTATTGTTTGCATCTCACCCTTATCTACCCTTGAATCCAAATTGCTACATCTTGTTGTTGTTTTATCAGATGGCAAAAGGATGTACCTGTCCACCTCTCCTTCTAGCGGAAGCCTGAATGGATTTAACACCAACCATCACAAGCCTAGCTGTTTAAAGGTTGTCACAACAAGGCCTGCTCCTCCTTGGGGTGTTAGTGGCGGTCTCACCTTTGGAACCATGGCTCTTGCTGGTAGACCTCAAAATGAGGATCTCTCACTGAAAGTCGAGGCAGCCTATTATTCTGCTGGAACTCTCATCCTTTCTGATGCATCACCTCCAACTATGCCTTCACTTCTTGTATTAAACAGGGATTCGAGCACACAGTCATCTCCATCGGGTAATCTTGGAACAGGTACGAGGAGTTCCCGTGCATTACGGGAAACTGTATCTTCTTTACCAGTTGAAGGTCGAATGCTTTCTGTGGCCGATGTTTTACCTCTACCAGATACTTCAGCCACTGTGCAGTCTCTATATTCAGAAATCGAGTTTGGTGGTTATGAGAGCTCAATGGAATCGTGTGAAAGGGCATCTGGCAAACTGTGGGCAAGGGGAGACCTCTCAACCCAACATATATTGCCAAGGAGGAGGATCGTCATCTTCAGCACCATGGGCATGATGGAAATTGTTTTTAACAGGCCACTAGACATATTAAGGCGGCTATTAGAGTCCAATTCTCCGAGATCAGTTTTAGAAGATTTCTTCAATCGTTTTGGTGCCGGCGAGGCAGCTGCGATGTGCTTAATGCTGGCTGCGAGAATAGTACATTCTGAAAACTTTATCAGCAATGTTATTGCAGAGAAGGCAGCTGAAGCTTTTGAGGACCCAAGACTTGTTGGCATGCCACAACTTGAAGGCAGTAATGCATTATCTAACACAAGAACTGCTGCTAGTGGATTTAGCATGGGCCAGGTTGTTCAGGAGGCTGAGCCTGTTTTTTCAGGTGCACATGAAGGGCTCTGTTTGTGTTCATCTAGATTACTCTTTCCTCTATGGGAACTACCTGTAATGGTTATAAAAGGAAGTTTAAGTGCTACAGGCACTTCATTTGAAAATGGGGTGGTTGTATGCAGACTATCCATCGGGGCTATGCAAGTCCTTGAACACAAACTTCGATCTTTAGAGAAATTCTTAAGATCTAGAAGGAACCAGAGGAGGGGACTTTATGGTTGTGTAGCAGGTTTAGGGGATGTGAGTGGTTCCATTCTATATGGTAGTGGTTCTGCATTGGGTGCTGGTGACCGAAGTATGGTAAGAACCTTGTTTGGTGCATATTCCAAAAATATGGAGTCCAATGGCGGTGGAGCCGCAAATAAAAGGCAAAGGTTGCCATATAGTCCTGCAGAATTAGCTGCCATGGAGGTGAGGGCAATGGAATGCATTAGGCAGTTGCTCCTTAGATCTGGTGAAGCTCTCTTTTTGCTTCAACTTCTCTCACAGCATCATGTCACTCGTCTGATTCAAGAATTTGATGCTAACCTTCAACAAGCCTTAGTTCAGTTAACATTTCATCAACTAGTTTGTTCTGAAGAGGGTGACAGTCTTGCTACAAGGCTTATATCTGCTCTAATGGAGTATTACACTGGTACAGATGGCAGGGGAACTGTAGATGACATTAGTAAGAGATTAAGAGAGGGTTGTCCAAGCTACTATAAGGAGTCTGATTACAAATTCTTCTTAGCCGTGGAAGCCCTCGAGAGAGCTGCTGTGACTATAGATGATGAGGAAAAGGAGACTCTCGCGCGGGAGGCATTGAATTCCTTAAGCAAAGTTCCAGAGGCTGCAGACTTACGTACTGTTTGCAAACGTTTTGAGGATTTAAGGTTTTATGAAGCTGTAGTGTGCTTACCTCTTCAGAAGGCACAGGCTATCGACCCTGCAGGTGATGCTTATAATGATGAAATTGATGCAACAGTCAGAGAACAAGCACTTGCTCAGCGTGAGCAGTGTTATGAAATAATTATCAGTGCTTTGAGGTCTCTTAAAGGTGACATCTTGCGGAAGGAATTTGGCTCTCCCATTAAATCTGCTTCACAATCTGCACTTGATCCAGCCTCCCGGAAAAAGTATATAAGCCAAATTGTTCAGCTGGGTGTCCAATCACCAGACAGAATTTTCCATGAGTATCTTTACCAGGCTATGATCGAATTAGGTCTTGAGAATGAATTGTTAGAGTATGGAGGCCCTGACCTATTACCATTCTTAAAAAGTGCTGGTCGTACACCCATACATGAGGTTCGTGCTGTGACTGCAACAACTTCTCCAATGGGCCAATCTGGAGCACCTATGACGTCTAATCAAGTCAAGTACTTTGAACTTTTGGCACGGTATTATGTCTTGAAGCGGCAACATATGCTTGCTGCTCATGCATTGCTAAGATTAGCTGGAAGGCCTTCTACTGACGGAGCTCCTACTCTTGAGCAGAGGTGTCAATACCTAAGTAATGCAGTTTTACAAGCAAAGAATGCAACAAATAGTGATGGGTTGGTTAGTTCTACTCGGAGTTCTAGCGACACTGGATTACTAGATATGCTTGAAGGGAAGCTTGCTGTTCTTCGGTTTCAGATAAAAATCAAAGAGGAACTAGAGCATATGGCTTCCAGTTCTGAGGTTTTACACAGCACATCCAATTCTGTTGAAAATGGTTTAGTCCCTGATGCCAGCTCAACTATTGATGCCAATTTTGCAAACGCAACACGAGAGAAAGCCAAAGAGCTATCATCAGATTTGAAGAGCATAACACAGTTATATAATGAATACGCTGTTCCCTTTAAACTCTGGGAGACATGCCTGGAGATGTTGTACTTTGCCAACTATTCTGGGGATAGTGACAGTAGCATTGTCAGAGAGACATGGGCTAGACTTATAGATCAAGCTATTTCAGGAGGTGGCATTGCCGAAGCTTGCTCGGTGCTAAAGAGACTTGGGCCCCGCCTTTATCCGGGTGATGGAACTGTTTTTCAGCTTGACGTTATTTGTCTTCACCTGGAAAAGGCTGCACTGGAGAGATTAAATTCAGGGGTTGAATCCGTTGGAGATGAAGATGTTGCGAGAGCCCTTGTTTCTGCTTGTAAGGGTGCAGCAGAACCAGTATTGAACGCATATGATCAATTGTTATCAAATGGGGCAATTTTGCCATCCCCAAATCTTAGATTACGGATGCTGAGATCAGTTCTGGTGGTACTTCGTGAGTGGGCTATGTCAATATATTCACACAGGATGGGTACAGGTCCCACTGGGTCTTCCCTAATACTAGGTGGAGGATTCTCATTGGAACGTTCAGTTGCTAGTCAAGGAATTCGGGACAAGATCACAAGTGTGGCAAACAGGTATATGACTGAAGTACGGAGGTTAGCCCTTCCACAAAGCCAAACAGAAGTGGTTTATCGAGGTTTTAAAGAACTTGAAGAGTCGCTCATAAGTCCTCATTCATTTGATCGATTTTGA 4455 0.4411 MSWEDEIVIRDVTNAGLVVSDRIGREVSSQLDLEESLEASRYASHPYSTHPREWPPLVEVANTWELPPVLIERYNAAGGEGTAFCGIFPEIRRAWASVDNSLFMWRFDKWDGQCPEYSGEEQAICAVGLSKSKHGVFVEAIQYLLILATPVELILVGVCCSGGADGSDPFSEVSLQPLPDYTIPSDGVTMTCVACTDKGRIFLAGRDGHIYELLYSTGSGWQKRCRKVCVTAGLGSVISRWVIPNVFNFGAVDPVVEMVFDNERQILYARTEEMKLQVYVLGPIGDGPLKKIAEERNLVNQRDPHHGARQSSGSRVSSRSPKPSIVCISPLSTLESKLLHLVVVLSDGKRMYLSTSPSSGSLNGFNTNHHKPSCLKVVTTRPAPPWGVSGGLTFGTMALAGRPQNEDLSLKVEAAYYSAGTLILSDASPPTMPSLLVLNRDSSTQSSPSGNLGTGTRSSRALRETVSSLPVEGRMLSVADVLPLPDTSATVQSLYSEIEFGGYESSMESCERASGKLWARGDLSTQHILPRRRIVIFSTMGMMEIVFNRPLDILRRLLESNSPRSVLEDFFNRFGAGEAAAMCLMLAARIVHSENFISNVIAEKAAEAFEDPRLVGMPQLEGSNALSNTRTAASGFSMGQVVQEAEPVFSGAHEGLCLCSSRLLFPLWELPVMVIKGSLSATGTSFENGVVVCRLSIGAMQVLEHKLRSLEKFLRSRRNQRRGLYGCVAGLGDVSGSILYGSGSALGAGDRSMVRTLFGAYSKNMESNGGGAANKRQRLPYSPAELAAMEVRAMECIRQLLLRSGEALFLLQLLSQHHVTRLIQEFDANLQQALVQLTFHQLVCSEEGDSLATRLISALMEYYTGTDGRGTVDDISKRLREGCPSYYKESDYKFFLAVEALERAAVTIDDEEKETLAREALNSLSKVPEAADLRTVCKRFEDLRFYEAVVCLPLQKAQAIDPAGDAYNDEIDATVREQALAQREQCYEIIISALRSLKGDILRKEFGSPIKSASQSALDPASRKKYISQIVQLGVQSPDRIFHEYLYQAMIELGLENELLEYGGPDLLPFLKSAGRTPIHEVRAVTATTSPMGQSGAPMTSNQVKYFELLARYYVLKRQHMLAAHALLRLAGRPSTDGAPTLEQRCQYLSNAVLQAKNATNSDGLVSSTRSSSDTGLLDMLEGKLAVLRFQIKIKEELEHMASSSEVLHSTSNSVENGLVPDASSTIDANFANATREKAKELSSDLKSITQLYNEYAVPFKLWETCLEMLYFANYSGDSDSSIVRETWARLIDQAISGGGIAEACSVLKRLGPRLYPGDGTVFQLDVICLHLEKAALERLNSGVESVGDEDVARALVSACKGAAEPVLNAYDQLLSNGAILPSPNLRLRMLRSVLVVLREWAMSIYSHRMGTGPTGSSLILGGGFSLERSVASQGIRDKITSVANRYMTEVRRLALPQSQTEVVYRGFKELEESLISPHSFDRF* 1485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g0338 1484 MobiDBLite consensus disorder prediction 304 323 - -
Mal5g0338 1484 Gene3D - 531 883 - -
Mal5g0338 1484 Gene3D - 894 1053 IPR042533 -
Mal5g0338 1484 Gene3D - 1179 1462 IPR042538 -
Mal5g0338 1484 PANTHER NUCLEAR PORE COMPLEX PROTEIN NUP155 2 1481 IPR004870 GO:0005643|GO:0006913|GO:0017056
Mal5g0338 1484 PANTHER BNAC05G49530D PROTEIN 2 1481 - -
Mal5g0338 1484 Gene3D Nucleoporin, helical domain, central subdomain 1056 1153 IPR042537 -
Mal5g0338 1484 MobiDBLite consensus disorder prediction 434 463 - -
Mal5g0338 1484 Pfam Non-repetitive/WGA-negative nucleoporin C-terminal 871 1291 IPR007187 -
Mal5g0338 1484 Pfam Nup133 N terminal like 54 543 IPR014908 -
Mal5g0338 1484 MobiDBLite consensus disorder prediction 435 463 - -
Mal5g0338 1484 MobiDBLite consensus disorder prediction 299 323 - -
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g0338 5 5386006 5395978 Mal5g0338 5 5386006 5395978 ECH