Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g0334 ATGGAGTCGAAGGGTCTACGTTTCATGACCCACCAATCAATTTTCACCATGGTTGGATCTGGAGACCTTGATGGGTTGAAGAAACTGTTGGAGAAGCTTAAAAAGGAAGAAGATGATAATAGTAATAATGGGTCATCATCATCATCACCTATGTCAGTTTCTGAAGTTATGTCTCTTCAGAATGATCATGGTGAAACACCACTTTACATAGCTGCACAGAATAATCTGAAGGAAGTTTTCACCTTTTTGATGAAATTGTGTGATTTTGAGGCTCTTAAGATTCGTTCTAAGTCTGATATGAACGCTTTTCATGTTGCAGCTAAGCGTGGCCATCTTGATATTGTGAGGGAGATTTTGAGTGCCTGGCCCGAGGTTTGTAAGTTTTGCGACTCGACAAACACCAGTCCTCTATATTCTGCTGCAGTTCAAGATCACTTGGATGTGGTAAATGCTATTTTGGATGTTGATGTAGGCTCCATGTTTATAGTTAGGAAAAATGGAAAAACTGCACTACACAATGCTGTTAGGTATGGCGTTGATCGTATTGTGAAAGCGCTTATTGTTCGGGATCCAGGGATAGTCTGCATCAAAGATAAAAAAGGTCAAACTGCACTTCATATGGCTGTCAAAGGACAGAGTACATCAGTGGTGGAGGAGATATTACAAGCTGATCCTACTATATTGAACGAACGAGATAAGAAGGGTAATACTGCTCTTCACATGGCTACGCGGAAAGGCCGGTCTCAGATAGTGAGCTATTTGCTAAGCTATGCAGCTGTGGATGTTAATGCCATCAATAAGCAACAAGAAACAGCCTTGGATTTGGCAGATAAACTGCCATATGGATCTTCAGCTTTAGAAATCCAAGAAGCACTTTCAGAATATGGTGCTAAATATGCAAGACATGTTGGTAAAGTAGATGAAGCCATGGAACTTAAAAGAACAGTGAGTGATATAAAGCATGAGGTGCAGTCACAGCTCATACAAAACGAAAAAACTCGCCGACGAGTTTCCGGTATAGCTAAGGAATTGAAGAAACTTCATAGAGAAGCCGTTCAAAACACCATCAACTCTGTCACGGTCGTTGCTGTCCTTTTCGCCTCAATAGCATTCTTGGCTATATTCAATTTGCCGGGTCAATATATTATGAAAGGATCACATAAAGGAGAATCTAACATTGCTGATCATGTTGGATTCCAAATTTTCTGTCTCTTGAATTCGACGTCTCTTTTCATTTCTCTTGCAGTTGTTGTTGTTCAAATCACTTTGGTAGCTTGGGACACTAGGGCTCAAAGACAGATTGTGTCGGTCGTTAACAAGCTAATGTGGGCTGCTTGTGCTTGCACATGTGGCGCTTTTCTCGCTATTGCTTTTGAGGTTGTTGGAAAGAAAAAATGGATGGCTGTTACCATAACTGTTTTGGGGATACCAATCCTAGTTGGGACTCTGGCAAGCATGTGCTACTTTGTTTTTCGACAACATTTTGGCATTTTCCAAAGTGATTCGCAGAGACGAATCAAGAGAGCAAGTGGAAGCAAATCTTTCTCCTGGTCTTACTCTGCAAATATATCTGATTTGGACGAATACAATTCGGATATTGAGAAGATCTATGCTCTGTAA 1620 0.4074 MESKGLRFMTHQSIFTMVGSGDLDGLKKLLEKLKKEEDDNSNNGSSSSSPMSVSEVMSLQNDHGETPLYIAAQNNLKEVFTFLMKLCDFEALKIRSKSDMNAFHVAAKRGHLDIVREILSAWPEVCKFCDSTNTSPLYSAAVQDHLDVVNAILDVDVGSMFIVRKNGKTALHNAVRYGVDRIVKALIVRDPGIVCIKDKKGQTALHMAVKGQSTSVVEEILQADPTILNERDKKGNTALHMATRKGRSQIVSYLLSYAAVDVNAINKQQETALDLADKLPYGSSALEIQEALSEYGAKYARHVGKVDEAMELKRTVSDIKHEVQSQLIQNEKTRRRVSGIAKELKKLHREAVQNTINSVTVVAVLFASIAFLAIFNLPGQYIMKGSHKGESNIADHVGFQIFCLLNSTSLFISLAVVVVQITLVAWDTRAQRQIVSVVNKLMWAACACTCGAFLAIAFEVVGKKKWMAVTITVLGIPILVGTLASMCYFVFRQHFGIFQSDSQRRIKRASGSKSFSWSYSANISDLDEYNSDIEKIYAL* 540
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Mal5g0334 539 PANTHER PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT 2 539 - -
Mal5g0334 539 MobiDBLite consensus disorder prediction 42 57 - -
Mal5g0334 539 Gene3D - 160 314 IPR036770 -
Mal5g0334 539 PANTHER ANKYRIN REPEAT PLANT-LIKE PROTEIN 2 539 - -
Mal5g0334 539 ProSiteProfiles Ankyrin repeat region circular profile. 234 259 - -
Mal5g0334 539 ProSiteProfiles Ankyrin repeat profile. 166 187 IPR002110 GO:0005515
Mal5g0334 539 Coils Coil 330 350 - -
Mal5g0334 539 Pfam Ankyrin repeats (3 copies) 158 227 IPR002110 GO:0005515
Mal5g0334 539 Pfam Ankyrin repeats (3 copies) 68 154 IPR002110 GO:0005515
Mal5g0334 539 Gene3D - 8 159 IPR036770 -
Mal5g0334 539 SUPERFAMILY Ankyrin repeat 14 297 IPR036770 -
Mal5g0334 539 ProSiteProfiles Ankyrin repeat profile. 234 267 IPR002110 GO:0005515
Mal5g0334 539 SMART ANK_2a 234 264 IPR002110 GO:0005515
Mal5g0334 539 SMART ANK_2a 132 162 IPR002110 GO:0005515
Mal5g0334 539 SMART ANK_2a 200 229 IPR002110 GO:0005515
Mal5g0334 539 SMART ANK_2a 63 91 IPR002110 GO:0005515
Mal5g0334 539 SMART ANK_2a 166 195 IPR002110 GO:0005515
Mal5g0334 539 SMART ANK_2a 98 127 IPR002110 GO:0005515
Mal5g0334 539 Coils Coil 23 43 - -
Mal5g0334 539 Pfam Domain of unknown function 350 457 IPR026961 -
Mal5g0334 539 ProSiteProfiles Ankyrin repeat region circular profile. 166 187 - -
Mal5g0334 539 MobiDBLite consensus disorder prediction 35 57 - -
Mal5g0334 539 Pfam Ankyrin repeat 235 266 IPR002110 GO:0005515
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Mal5g0334 Mal-Chr5 5345540 5348723 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g0334 1 539 Miscellaneous Gene Families AT2G01680 68.577 0.0 735
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g0334 5 5345540 5348723 Mal5g0334 5 5345540 5348723 ECH