Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g4977 ATGGACTCAAAATCATTATGTTTCATAACCCACCAAGATATTTTCAATGTGGTTCGATCTGGAGATATTGAAGGACTCAAAGAGCTATTGAAACATGTTAACAAAGGTGAATCCTCAAATGGGTCATCATCATCATCATCAATTTTTGAGCTCATGTCCATGCAGAATGATGCTGGAGAGACATTATTGTGTATAGCTGCAGAAAATGGTGTTAAGGATGTGTTTAGTTTCTTGTTAAGGTTATGTGATTTGGAGATACTCAAGATCAGGTCTAAATCTGATATGAATGCTTTTCATGTTGCAGCTAAGCGTGGCCATTTGGAAATTGTGAGGGAGATTTTGAGTACTTGGCCCGAGGCTTGTAAGTTATGTGACTCCTCGAACACTAGTCCACTTTATTTAGCTGCTGTTCAAGACCATTTAGATGTGGTGAATGCTATTCTGGATGTTGATGTCAGTTCAATGATGATAGTCAGGAAAAACGGCAAAACTGCGTTGCACAATGCGGCTAGGTATGGCATTCTCCGCATCGTGAAAGCACTTATTGCAAGGGACTCAGCAATTGTTTGCATCAAAGATAAAAAGGGTCAAACAGCACTTCATATGGCTGTAAAAGGACAGAGTACTTCAGTGGTGGAGGAGATATTACAAGCTGATCCAATGGTATTAAACGAAAAAGATAAGAAGGGTAATACAGCTCTTCACATGGCCACTCGGAAAGCTCGTTCGCAGATAGTGAGATTTTTGTTAAGCTATGCATCTATGAATGTCAATGCAATCAATAATCAGCAAGAAACAGCCTTGGATTTGGCAGATAAACTTCCGTACAGAGATTCATCTTTGGAAATCAAGGAAGCCCTTTCGGAATGTGGTGCCAAGAATGCCAGACATATTGGCAAAGTGAACGAAGCCATGGAACTTAAAAGAGTTGTGAGTGATATAAAGCACGAGGTGCAGTCACAACTGGTACAGAACGAAAAAACTCGCAAACGTGTTTCTGGTATAGCTAAGGAATTGAGGAAAATTCATAGGGAAGCAGTCCAAAACACCATAAATTCTGTCACAGTAGTTGCTGTCCTTTTTGCATCAATAGCATTCATGGCTTTGTTCAGTTTGCCAGGTCAATATAGAAAGCAACAGCCAGAGGCAGGGAAGGCGAATATAGCTCACGAAGTTGCTTTCAGTGTTTTCTGTCTTTTAAATGCGACGTCTCTTTTCATTTCTCTTGCGGTTGTTGTTGTTCAAATAACTTTGGTAGCTTGGGACACCAGGGCTCAAAGACAGATTGTATCGGTGATTAACAAGCTAATGTGGACGGCTTGTGCGTGCACTTGTGGAGCATTTCTTGCAATAGCTTTTGTTGTTGTTGGAAAGGAAAGATGGATGGCTACTACTGTAACCGTTTTGGGAACACCGATTCTAGTTGGGACTCTAGCATACTTGTGCTACTTTGTGTTTCGGCGACATTTTGGATTTCGAAGTGAATCCCAGAGAGTACTAGCTAAGAGACCAAGTGGAAGCAAATCGTTCTCGTGGTCTTACTCTGCGCATATATCAGATGAAGAGGAATATAATTCTGATGTTGAGAAGATCTATGCTCTTTGA 1605 0.4081 MDSKSLCFITHQDIFNVVRSGDIEGLKELLKHVNKGESSNGSSSSSSIFELMSMQNDAGETLLCIAAENGVKDVFSFLLRLCDLEILKIRSKSDMNAFHVAAKRGHLEIVREILSTWPEACKLCDSSNTSPLYLAAVQDHLDVVNAILDVDVSSMMIVRKNGKTALHNAARYGILRIVKALIARDSAIVCIKDKKGQTALHMAVKGQSTSVVEEILQADPMVLNEKDKKGNTALHMATRKARSQIVRFLLSYASMNVNAINNQQETALDLADKLPYRDSSLEIKEALSECGAKNARHIGKVNEAMELKRVVSDIKHEVQSQLVQNEKTRKRVSGIAKELRKIHREAVQNTINSVTVVAVLFASIAFMALFSLPGQYRKQQPEAGKANIAHEVAFSVFCLLNATSLFISLAVVVVQITLVAWDTRAQRQIVSVINKLMWTACACTCGAFLAIAFVVVGKERWMATTVTVLGTPILVGTLAYLCYFVFRRHFGFRSESQRVLAKRPSGSKSFSWSYSAHISDEEEYNSDVEKIYAL* 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g4977 534 ProSiteProfiles Ankyrin repeat profile. 229 251 IPR002110 GO:0005515
Mal1g4977 534 SMART ANK_2a 93 122 IPR002110 GO:0005515
Mal1g4977 534 SMART ANK_2a 58 86 IPR002110 GO:0005515
Mal1g4977 534 SMART ANK_2a 229 259 IPR002110 GO:0005515
Mal1g4977 534 SMART ANK_2a 195 225 IPR002110 GO:0005515
Mal1g4977 534 SMART ANK_2a 161 190 IPR002110 GO:0005515
Mal1g4977 534 SMART ANK_2a 127 157 IPR002110 GO:0005515
Mal1g4977 534 Gene3D - 4 155 IPR036770 -
Mal1g4977 534 PANTHER ANKYRIN REPEAT PLANT-LIKE PROTEIN 2 534 - -
Mal1g4977 534 Gene3D - 156 307 IPR036770 -
Mal1g4977 534 ProSiteProfiles Ankyrin repeat region circular profile. 229 251 - -
Mal1g4977 534 ProSiteProfiles Ankyrin repeat region circular profile. 161 188 - -
Mal1g4977 534 Pfam Domain of unknown function 345 454 IPR026961 -
Mal1g4977 534 PANTHER PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT 2 534 - -
Mal1g4977 534 Pfam Ankyrin repeats (3 copies) 193 258 IPR002110 GO:0005515
Mal1g4977 534 Pfam Ankyrin repeats (3 copies) 63 149 IPR002110 GO:0005515
Mal1g4977 534 ProSiteProfiles Ankyrin repeat profile. 161 188 IPR002110 GO:0005515
Mal1g4977 534 SUPERFAMILY Ankyrin repeat 14 277 IPR036770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g4977 Mal-Chr1 120099706 120102660 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g4977 1 534 Miscellaneous Gene Families AT2G01680 67.850 0.0 716
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g4977 1 120099706 120102660 Mal1g4977 1 120099706 120102660 ECH